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Cluster: B1.bin_1_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B1_contig_4759 B1_contig_4759_2 1619 3346 + 9.B.33.1.1
STP B1_contig_4759 B1_contig_4759_3 3627 4886 + SBP_bac_1
TC B1_contig_4759 B1_contig_4759_4 4974 5879 + 3.A.1.1.34
TC B1_contig_4759 B1_contig_4759_5 5876 6733 + 3.A.1.1.42
STP B1_contig_4759 B1_contig_4759_6 6753 7622 + PIG-L
CAZyme B1_contig_4759 B1_contig_4759_7 7635 9977 + GH65
NULL(UNKNOWN) B1_contig_4759 B1_contig_4759_8 10058 10933 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme B1_contig_4759 B1_contig_4759_9 11003 12292 + GH16_24
Gene ID: B1_contig_4759_2
Type: TC
Location: 1619 - 3346 (+)
Gene ID: B1_contig_4759_3
Type: STP
Location: 3627 - 4886 (+)
Gene ID: B1_contig_4759_4
Type: TC
Location: 4974 - 5879 (+)
Gene ID: B1_contig_4759_5
Type: TC
Location: 5876 - 6733 (+)
Gene ID: B1_contig_4759_6
Type: STP
Location: 6753 - 7622 (+)
Gene ID: B1_contig_4759_7
Type: CAZyme
Location: 7635 - 9977 (+)
Gene ID: B1_contig_4759_8
Type:
Location: 10058 - 10933 (+)
Gene ID: B1_contig_4759_9
Type: CAZyme
Location: 11003 - 12292 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Clostridiales
→
Family
Clostridiaceae
→
Genus
Sarcina
→
Species
Sarcina perfringens

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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