Cluster: B1.bin_1_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: B1.bin_1
- CGC Family ID: CGCFAM_07459
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B1_contig_1146 | B1_contig_1146_323 | 372330 | 374753 | - | GH73 |
| TC | B1_contig_1146 | B1_contig_1146_324 | 374774 | 376225 | - | 2.A.66.2.22 |
| pfam | B1_contig_1146 | B1_contig_1146_325 | 376234 | 376974 | - | LicD |
| CAZyme | B1_contig_1146 | B1_contig_1146_326 | 377068 | 377916 | - | GT2 |
Gene ID: B1_contig_1146_323
Type: CAZyme
Location: 372330 - 374753 (-)
Type: CAZyme
Location: 372330 - 374753 (-)
Gene ID: B1_contig_1146_324
Type: TC
Location: 374774 - 376225 (-)
Type: TC
Location: 374774 - 376225 (-)
Gene ID: B1_contig_1146_325
Type: pfam
Location: 376234 - 376974 (-)
Type: pfam
Location: 376234 - 376974 (-)
Gene ID: B1_contig_1146_326
Type: CAZyme
Location: 377068 - 377916 (-)
Type: CAZyme
Location: 377068 - 377916 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Sarcina
Species
Sarcina perfringens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.