Cluster: B1.bin_1_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: B1.bin_1
- CGC Family ID: CGCFAM_00250
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B1_contig_2285 | B1_contig_2285_655 | 728621 | 729919 | - | 2.A.40.1.1 |
| TC | B1_contig_2285 | B1_contig_2285_656 | 730106 | 731689 | + | 3.A.1.121.4 |
| CAZyme | B1_contig_2285 | B1_contig_2285_657 | 731740 | 732702 | - | CE4 |
| TC | B1_contig_2285 | B1_contig_2285_658 | 733086 | 735272 | - | 3.A.7.7.1 |
Gene ID: B1_contig_2285_655
Type: TC
Location: 728621 - 729919 (-)
Type: TC
Location: 728621 - 729919 (-)
Gene ID: B1_contig_2285_656
Type: TC
Location: 730106 - 731689 (+)
Type: TC
Location: 730106 - 731689 (+)
Gene ID: B1_contig_2285_657
Type: CAZyme
Location: 731740 - 732702 (-)
Type: CAZyme
Location: 731740 - 732702 (-)
Gene ID: B1_contig_2285_658
Type: TC
Location: 733086 - 735272 (-)
Type: TC
Location: 733086 - 735272 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Sarcina
Species
Sarcina perfringens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.