Cluster: B1.bin_1_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: B1.bin_1
- CGC Family ID: CGCFAM_02396
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B1_contig_1146 | B1_contig_1146_116 | 123586 | 125376 | - | 3.A.1.111.2 |
| TC | B1_contig_1146 | B1_contig_1146_117 | 125376 | 127187 | - | 3.A.1.111.2 |
| pfam | B1_contig_1146 | B1_contig_1146_118 | 127502 | 128455 | - | CAP |
| CAZyme | B1_contig_1146 | B1_contig_1146_119 | 129249 | 131663 | - | GH2 |
Gene ID: B1_contig_1146_116
Type: TC
Location: 123586 - 125376 (-)
Type: TC
Location: 123586 - 125376 (-)
Gene ID: B1_contig_1146_117
Type: TC
Location: 125376 - 127187 (-)
Type: TC
Location: 125376 - 127187 (-)
Gene ID: B1_contig_1146_118
Type: pfam
Location: 127502 - 128455 (-)
Type: pfam
Location: 127502 - 128455 (-)
Gene ID: B1_contig_1146_119
Type: CAZyme
Location: 129249 - 131663 (-)
Type: CAZyme
Location: 129249 - 131663 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Sarcina
Species
Sarcina perfringens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.