Cluster: B1.bin_1_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: B1.bin_1
- CGC Family ID: CGCFAM_00011
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B1_contig_1146 | B1_contig_1146_671 | 784294 | 785727 | - | GT4 |
| TC | B1_contig_1146 | B1_contig_1146_672 | 785842 | 787023 | - | 3.A.1.103.1 |
| CAZyme | B1_contig_1146 | B1_contig_1146_673 | 787037 | 788272 | - | GT4 |
| CAZyme | B1_contig_1146 | B1_contig_1146_674 | 788291 | 789574 | - | GT4 |
| TC | B1_contig_1146 | B1_contig_1146_675 | 789588 | 790760 | - | 3.A.1.103.1 |
Gene ID: B1_contig_1146_671
Type: CAZyme
Location: 784294 - 785727 (-)
Type: CAZyme
Location: 784294 - 785727 (-)
Gene ID: B1_contig_1146_672
Type: TC
Location: 785842 - 787023 (-)
Type: TC
Location: 785842 - 787023 (-)
Gene ID: B1_contig_1146_673
Type: CAZyme
Location: 787037 - 788272 (-)
Type: CAZyme
Location: 787037 - 788272 (-)
Gene ID: B1_contig_1146_674
Type: CAZyme
Location: 788291 - 789574 (-)
Type: CAZyme
Location: 788291 - 789574 (-)
Gene ID: B1_contig_1146_675
Type: TC
Location: 789588 - 790760 (-)
Type: TC
Location: 789588 - 790760 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Sarcina
Species
Sarcina perfringens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.