Cluster: B1.bin_1_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: B1.bin_1
- CGC Family ID: CGCFAM_02602
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B1_contig_1146 | B1_contig_1146_629 | 738362 | 739762 | - | AA4 |
| pfam | B1_contig_1146 | B1_contig_1146_630 | 739764 | 740957 | - | ETF_alpha | ETF |
| pfam | B1_contig_1146 | B1_contig_1146_631 | 740970 | 741758 | - | ETF |
| TC | B1_contig_1146 | B1_contig_1146_632 | 741853 | 743376 | - | 2.A.14.1.2 |
Gene ID: B1_contig_1146_629
Type: CAZyme
Location: 738362 - 739762 (-)
Type: CAZyme
Location: 738362 - 739762 (-)
Gene ID: B1_contig_1146_630
Type: pfam
Location: 739764 - 740957 (-)
Type: pfam
Location: 739764 - 740957 (-)
Gene ID: B1_contig_1146_631
Type: pfam
Location: 740970 - 741758 (-)
Type: pfam
Location: 740970 - 741758 (-)
Gene ID: B1_contig_1146_632
Type: TC
Location: 741853 - 743376 (-)
Type: TC
Location: 741853 - 743376 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Sarcina
Species
Sarcina perfringens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.