Cluster: B1.bin_1_CGC26
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: B1.bin_1
- CGC Family ID: CGCFAM_00174
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B1_contig_2285 | B1_contig_2285_679 | 757420 | 758883 | - | GH32 |
| TF | B1_contig_2285 | B1_contig_2285_680 | 758923 | 759900 | - | LacI |
| TC | B1_contig_2285 | B1_contig_2285_681 | 760032 | 761384 | - | 4.A.1.2.1 |
Gene ID: B1_contig_2285_679
Type: CAZyme
Location: 757420 - 758883 (-)
Type: CAZyme
Location: 757420 - 758883 (-)
Gene ID: B1_contig_2285_680
Type: TF
Location: 758923 - 759900 (-)
Type: TF
Location: 758923 - 759900 (-)
Gene ID: B1_contig_2285_681
Type: TC
Location: 760032 - 761384 (-)
Type: TC
Location: 760032 - 761384 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Sarcina
Species
Sarcina perfringens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.