CGCs
Total: 123241 Gene Clusters| Cluster ID ↓ | CGC Family | Total Gene Count | CAZyme Gene Count | Substrate | CAZymes | Continent |
|---|---|---|---|---|---|---|
| BrooksB_2017_SRR5405894_bin.8_CGC27 | — | 7 | 2 | — |
GH106
Pectin (rhamnogalacturonan i), Pectin (rhamnogalacturonan ii)
GH36
Alpha-galactoside (galactose oligosaccharides, galactomannans and galactolipid), Acetylgalactosamine (human blood group a and b, mucin glycoproteins), Raffinose/stachyose oligosaccharides (plant seeds), Raffinose oligosaccharides
|
North America |
| BrooksB_2017_SRR5405894_bin.8_CGC26 | CGCFAM_06995 | 7 | 2 | — |
GH28
Xylogalacturonan (pectin), Galacturonan (pectin), Rhamnogalacturonan (pectin), Pectin (rhamnogalacturonan i)
GH105
Pectin, Pectin (rhamnogalacturonan i), Ulvan
|
North America |
| BrooksB_2017_SRR5405894_bin.8_CGC24 | CGCFAM_00020 | 5 | 2 | host glycan beta-glucan |
GH1
Strictosidine (monoterpene indole alkaloids), Beta-fucosides, Beta-galactoside, 6-phospho-beta-galactoside, Beta-glucan, Beta-glucoside, 6-phospho-beta-glucoside, Ceramide b-galactosidase, Beta-glucuronoside, Beta-mannoside, Glc-conjugated aba (plant), Raucaffricine (glucoalkaloid), Lactose in milk, phlorizin (polyphenols) in fruit, Rutin (polyphenol), Amygdalin (cyanogenic glycosides), Prunasin (cyanogenic glycosides), Vicianin (cyanogenic glycosides), Glucosinolates (sulfur-containing phytochemicals), Beta-primeverosides (tea plant phytochemicals), Daidzin and genistin, furcatin (polyphenol), Dimboa glucoside (polyphenol), Furostanol (polyphenol), Phlorizin (polyphenols) in fruit, Isoflavone, Rutin, beta-xyloside
CE20
Xyloglucan
|
North America |
| BrooksB_2017_SRR5405894_bin.8_CGC23 | CGCFAM_02702 | 7 | 1 | — |
GH172
Arabinan, Fructooligosaccharides
|
North America |
| BrooksB_2017_SRR5405894_bin.8_CGC21 | — | 5 | 1 | — |
GH73
Mannosyl-glycoprotein, Peptidoglycan
|
North America |
| BrooksB_2017_SRR5405894_bin.8_CGC2 | CGCFAM_02152 | 14 | 2 | — |
GH1
Strictosidine (monoterpene indole alkaloids), Beta-fucosides, Beta-galactoside, 6-phospho-beta-galactoside, Beta-glucan, Beta-glucoside, 6-phospho-beta-glucoside, Ceramide b-galactosidase, Beta-glucuronoside, Beta-mannoside, Glc-conjugated aba (plant), Raucaffricine (glucoalkaloid), Lactose in milk, phlorizin (polyphenols) in fruit, Rutin (polyphenol), Amygdalin (cyanogenic glycosides), Prunasin (cyanogenic glycosides), Vicianin (cyanogenic glycosides), Glucosinolates (sulfur-containing phytochemicals), Beta-primeverosides (tea plant phytochemicals), Daidzin and genistin, furcatin (polyphenol), Dimboa glucoside (polyphenol), Furostanol (polyphenol), Phlorizin (polyphenols) in fruit, Isoflavone, Rutin, beta-xyloside
GH170
Peptidoglycan
|
North America |
| BrooksB_2017_SRR5405894_bin.8_CGC19 | — | 5 | 1 | — |
GH35
Beta-galactoside, Chitosan, chitin, Galactan and arabinogalactan
|
North America |
| BrooksB_2017_SRR5405894_bin.8_CGC18 | CGCFAM_00276 | 3 | 1 | — |
GH170
Peptidoglycan
|
North America |
| BrooksB_2017_SRR5405894_bin.8_CGC17 | — | 3 | 1 | — |
GH1
Strictosidine (monoterpene indole alkaloids), Beta-fucosides, Beta-galactoside, 6-phospho-beta-galactoside, Beta-glucan, Beta-glucoside, 6-phospho-beta-glucoside, Ceramide b-galactosidase, Beta-glucuronoside, Beta-mannoside, Glc-conjugated aba (plant), Raucaffricine (glucoalkaloid), Lactose in milk, phlorizin (polyphenols) in fruit, Rutin (polyphenol), Amygdalin (cyanogenic glycosides), Prunasin (cyanogenic glycosides), Vicianin (cyanogenic glycosides), Glucosinolates (sulfur-containing phytochemicals), Beta-primeverosides (tea plant phytochemicals), Daidzin and genistin, furcatin (polyphenol), Dimboa glucoside (polyphenol), Furostanol (polyphenol), Phlorizin (polyphenols) in fruit, Isoflavone, Rutin, beta-xyloside
|
North America |
| BrooksB_2017_SRR5405894_bin.8_CGC16 | CGCFAM_00107 | 5 | 2 | beta-glucan |
GH179
Chitin or peptidoglycan
GH50
Porphyran, agarose
|
North America |
| BrooksB_2017_SRR5405894_bin.8_CGC15 | — | 4 | 1 | — |
GH109
Mucin-type o-glycans
|
North America |
| BrooksB_2017_SRR5405894_bin.8_CGC14 | CGCFAM_00645 | 7 | 3 | — |
GH1
Strictosidine (monoterpene indole alkaloids), Beta-fucosides, Beta-galactoside, 6-phospho-beta-galactoside, Beta-glucan, Beta-glucoside, 6-phospho-beta-glucoside, Ceramide b-galactosidase, Beta-glucuronoside, Beta-mannoside, Glc-conjugated aba (plant), Raucaffricine (glucoalkaloid), Lactose in milk, phlorizin (polyphenols) in fruit, Rutin (polyphenol), Amygdalin (cyanogenic glycosides), Prunasin (cyanogenic glycosides), Vicianin (cyanogenic glycosides), Glucosinolates (sulfur-containing phytochemicals), Beta-primeverosides (tea plant phytochemicals), Daidzin and genistin, furcatin (polyphenol), Dimboa glucoside (polyphenol), Furostanol (polyphenol), Phlorizin (polyphenols) in fruit, Isoflavone, Rutin, beta-xyloside
GH39
Beta-galactoside, Beta-glucoside (exopolysaccharide, cellubiose), Beta-glucoside (cellubiose), Glycosaminoglycans heparan sulfate and dermatan sulfate (host glycan), Xylan
|
North America |
| BrooksB_2017_SRR5405894_bin.8_CGC13 | CGCFAM_01479 | 4 | 1 | galactan |
GH42
Paeonolide, ginsenoside, arabinoxylan, and arabinan, Beta-1, 6/1, 3-galactoside (arabinogalactan)
|
North America |
| BrooksB_2017_SRR5405894_bin.8_CGC12 | — | 14 | 3 | — |
GH51
Arabinan, arabinoxylan, Cellulose, beta-glucan, Xylan
GH43
Arabinan, arabinoxylan, Beta-1, 3-galactan, arabinogalactan, Beta-galactofuranoside, 3-xylan (algae), Xylan, Arabinoxylan
|
North America |
| BrooksB_2017_SRR5405894_bin.8_CGC10 | CGCFAM_02701 | 8 | 2 | — |
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
GT51
|
North America |
| BrooksB_2017_SRR5405894_bin.8_CGC1 | CGCFAM_00527 | 4 | 1 | — |
GT2
|
North America |
| BrooksB_2017_SRR5405854_bin.5_CGC9 | CGCFAM_02151 | 3 | 1 | — |
GH1
Strictosidine (monoterpene indole alkaloids), Beta-fucosides, Beta-galactoside, 6-phospho-beta-galactoside, Beta-glucan, Beta-glucoside, 6-phospho-beta-glucoside, Ceramide b-galactosidase, Beta-glucuronoside, Beta-mannoside, Glc-conjugated aba (plant), Raucaffricine (glucoalkaloid), Lactose in milk, phlorizin (polyphenols) in fruit, Rutin (polyphenol), Amygdalin (cyanogenic glycosides), Prunasin (cyanogenic glycosides), Vicianin (cyanogenic glycosides), Glucosinolates (sulfur-containing phytochemicals), Beta-primeverosides (tea plant phytochemicals), Daidzin and genistin, furcatin (polyphenol), Dimboa glucoside (polyphenol), Furostanol (polyphenol), Phlorizin (polyphenols) in fruit, Isoflavone, Rutin, beta-xyloside
|
North America |
| BrooksB_2017_SRR5405854_bin.5_CGC7 | CGCFAM_00401 | 9 | 2 | — |
GH177
Glycoproteins
CE7
Cephalosporin c(antibiotic), Acetylxylan
|
North America |
| BrooksB_2017_SRR5405854_bin.5_CGC5 | CGCFAM_01738 | 8 | 1 | — |
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
|
North America |
| BrooksB_2017_SRR5405854_bin.5_CGC4 | CGCFAM_01081 | 10 | 2 | — |
GH36
Alpha-galactoside (galactose oligosaccharides, galactomannans and galactolipid), Acetylgalactosamine (human blood group a and b, mucin glycoproteins), Raffinose/stachyose oligosaccharides (plant seeds), Raffinose oligosaccharides
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
|
North America |