Cluster: BrooksB_2017_SRR5405894_bin.8_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_1333 | BrooksB_2017_SRR5405894_bin.8_k119_1333_20 | 15534 | 16418 | - | 3.A.1.126.1 |
| STP | BrooksB_2017_SRR5405894_bin.8_k119_1333 | BrooksB_2017_SRR5405894_bin.8_k119_1333_21 | 16405 | 17046 | - | TetR_N |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_1333 | BrooksB_2017_SRR5405894_bin.8_k119_1333_22 | 17227 | 19185 | - | LacI |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_1333 | BrooksB_2017_SRR5405894_bin.8_k119_1333_23 | 19454 | 20509 | - | GH109 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_1333_20
Type: TC
Location: 15534 - 16418 (-)
Type: TC
Location: 15534 - 16418 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_1333_21
Type: STP
Location: 16405 - 17046 (-)
Type: STP
Location: 16405 - 17046 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_1333_22
Type: TF
Location: 17227 - 19185 (-)
Type: TF
Location: 17227 - 19185 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_1333_23
Type: CAZyme
Location: 19454 - 20509 (-)
Type: CAZyme
Location: 19454 - 20509 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.