Cluster: BrooksB_2017_SRR5405894_bin.8_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_2013 | BrooksB_2017_SRR5405894_bin.8_k119_2013_89 | 96733 | 98715 | - | GH73 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405894_bin.8_k119_2013 | BrooksB_2017_SRR5405894_bin.8_k119_2013_90 | 99415 | 99765 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_2013 | BrooksB_2017_SRR5405894_bin.8_k119_2013_91 | 99997 | 101157 | + | Cation_efflux | ZT_dimer |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_2013 | BrooksB_2017_SRR5405894_bin.8_k119_2013_92 | 101192 | 103180 | - | 3.A.1.134.9 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_2013 | BrooksB_2017_SRR5405894_bin.8_k119_2013_93 | 103183 | 103944 | - | 3.A.1.134.4 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2013_89
Type: CAZyme
Location: 96733 - 98715 (-)
Type: CAZyme
Location: 96733 - 98715 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2013_90
Type:
Location: 99415 - 99765 (-)
Type:
Location: 99415 - 99765 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2013_91
Type: pfam
Location: 99997 - 101157 (+)
Type: pfam
Location: 99997 - 101157 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2013_92
Type: TC
Location: 101192 - 103180 (-)
Type: TC
Location: 101192 - 103180 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2013_93
Type: TC
Location: 103183 - 103944 (-)
Type: TC
Location: 103183 - 103944 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.