Cluster: BrooksB_2017_SRR5405894_bin.8_CGC26
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_06995
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_2246 | BrooksB_2017_SRR5405894_bin.8_k119_2246_118 | 113504 | 114847 | + | GH28 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_2246 | BrooksB_2017_SRR5405894_bin.8_k119_2246_119 | 114903 | 116630 | + | 8.A.59.2.1 |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_2246 | BrooksB_2017_SRR5405894_bin.8_k119_2246_120 | 116627 | 118072 | + | HTH_AraC |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_2246 | BrooksB_2017_SRR5405894_bin.8_k119_2246_121 | 118334 | 119245 | + | 3.A.1.1.25 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_2246 | BrooksB_2017_SRR5405894_bin.8_k119_2246_122 | 119248 | 120084 | + | 3.A.1.1.33 |
| STP | BrooksB_2017_SRR5405894_bin.8_k119_2246 | BrooksB_2017_SRR5405894_bin.8_k119_2246_123 | 120113 | 121441 | + | SBP_bac_1 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_2246 | BrooksB_2017_SRR5405894_bin.8_k119_2246_124 | 121531 | 122619 | + | GH105 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2246_118
Type: CAZyme
Location: 113504 - 114847 (+)
Type: CAZyme
Location: 113504 - 114847 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2246_119
Type: TC
Location: 114903 - 116630 (+)
Type: TC
Location: 114903 - 116630 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2246_120
Type: TF
Location: 116627 - 118072 (+)
Type: TF
Location: 116627 - 118072 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2246_121
Type: TC
Location: 118334 - 119245 (+)
Type: TC
Location: 118334 - 119245 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2246_122
Type: TC
Location: 119248 - 120084 (+)
Type: TC
Location: 119248 - 120084 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2246_123
Type: STP
Location: 120113 - 121441 (+)
Type: STP
Location: 120113 - 121441 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2246_124
Type: CAZyme
Location: 121531 - 122619 (+)
Type: CAZyme
Location: 121531 - 122619 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.