Cluster: BrooksB_2017_SRR5405894_bin.8_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_00527
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_679 | BrooksB_2017_SRR5405894_bin.8_k119_679_6 | 4333 | 5640 | - | GT2 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405894_bin.8_k119_679 | BrooksB_2017_SRR5405894_bin.8_k119_679_7 | 5630 | 6142 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_679 | BrooksB_2017_SRR5405894_bin.8_k119_679_8 | 6334 | 6798 | + | HTH_3 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_679 | BrooksB_2017_SRR5405894_bin.8_k119_679_9 | 6798 | 7544 | + | 3.A.1.149.1 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_679_6
Type: CAZyme
Location: 4333 - 5640 (-)
Type: CAZyme
Location: 4333 - 5640 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_679_7
Type:
Location: 5630 - 6142 (-)
Type:
Location: 5630 - 6142 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_679_8
Type: TF
Location: 6334 - 6798 (+)
Type: TF
Location: 6334 - 6798 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_679_9
Type: TC
Location: 6798 - 7544 (+)
Type: TC
Location: 6798 - 7544 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.