Cluster: BrooksB_2017_SRR5405894_bin.8_CGC23
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_02702
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_2246 | BrooksB_2017_SRR5405894_bin.8_k119_2246_8 | 5986 | 7104 | - | GH172 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405894_bin.8_k119_2246 | BrooksB_2017_SRR5405894_bin.8_k119_2246_9 | 7101 | 9203 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_2246 | BrooksB_2017_SRR5405894_bin.8_k119_2246_10 | 9251 | 10072 | - | 4.A.6.1.19 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_2246 | BrooksB_2017_SRR5405894_bin.8_k119_2246_11 | 10069 | 10881 | - | 4.A.6.1.19 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_2246 | BrooksB_2017_SRR5405894_bin.8_k119_2246_12 | 10903 | 11397 | - | 4.A.6.1.19 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_2246 | BrooksB_2017_SRR5405894_bin.8_k119_2246_13 | 11410 | 11832 | - | EIIA-man |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_2246 | BrooksB_2017_SRR5405894_bin.8_k119_2246_14 | 11976 | 14591 | - | 3.A.23.1.1 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2246_8
Type: CAZyme
Location: 5986 - 7104 (-)
Type: CAZyme
Location: 5986 - 7104 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2246_9
Type:
Location: 7101 - 9203 (-)
Type:
Location: 7101 - 9203 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2246_10
Type: TC
Location: 9251 - 10072 (-)
Type: TC
Location: 9251 - 10072 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2246_11
Type: TC
Location: 10069 - 10881 (-)
Type: TC
Location: 10069 - 10881 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2246_12
Type: TC
Location: 10903 - 11397 (-)
Type: TC
Location: 10903 - 11397 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2246_13
Type: pfam
Location: 11410 - 11832 (-)
Type: pfam
Location: 11410 - 11832 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2246_14
Type: TC
Location: 11976 - 14591 (-)
Type: TC
Location: 11976 - 14591 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.