PROTEIN: BrooksB_2017_SRR5405894_bin.8_k119_2246_9
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Protein File & Metadata
Source:
BrooksB_2017_SRR5405894_bin.8_k119_2246_9.pdb
Genome ID:
Protein ID:
BrooksB_2017_SRR5405894_bin.8_k119_2246_9
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Protein Sequence
MTIKSIIHSK KHPVFNIETF GKVSSTTNPY SYYKNMKDTK GLTFDVSNQK VLANMDVQGT 60 VQCLTFYHNN LLTEEKPGVW VNKQLTQSNN LALTVKVAGI DYDLAQTDHR VEVDIIHDSL 120 PRFIHHYPTF KVIVVPFAPI IEGKRLSMLV QQVAIVSETQ RPLQVAEVNL VPLYQNKYSD 180 QQNVLIHQKG SEQIVNFGEI ATFSVAFVDP NAFKELPLFQ KSDTEVWLLD TLNYFDEIFG 240 ELVLPDENIK HLYNRAIYQS FSSFGMNHDN QIVGSNWGSY PATNRIWNKD MYYSSLPFLF 300 FDKELCQKTI LWFDQYGIKF PGSKFPGGIN HSLSNSLAST ILAVLYYEHT SDLDFFDGYP 360 EVLDNAMTIV DEVLAQQQPN EPMLFESTWI SDAFALGKYH TGSNLCLWKA CDGLAEILDV 420 KGFSVESKRY KDAAKAIKAA ICNQMTTEGP FGTQFLEGIG DEEQAKYAVS HYQKPILEQG 480 LIFLSDVIKD GKIDLLMHDG EESDTTLIPF YQFLASDDPL YQHTLAFAAN SANPTYSEEI 540 KGITWGLESG ATFPGFITVL MSELDNEKGF SNRLQELFSL ADLDGSWWWW PYRLGASRGD 600 VVRDFGCGKC GWAAGIFVSM LLSQYFGLTF IKGVLQINPI PNLEFTWSKL HFGKVFLSIE 660 CTKRYLNITN LSEELLTIRK NDEIVVLGKE EKIRIEREIK 700
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CSL2-F1-model_v4 | 1 | 700 | 1 | 699 | 0.9935 |
0.9965 |
| AF-K0ERA7-F1-model_v4 | 9 | 700 | 9 | 763 | 0.6947 |
0.7531 |
| AF-P9WN13-F1-model_v4 | 9 | 700 | 8 | 763 | 0.6931 |
0.7536 |
| AF-A0A132ZDE7-F1-model_v4 | 11 | 700 | 1 | 727 | 0.6854 |
0.7243 |
| AF-P77154-F1-model_v4 | 1 | 700 | 1 | 745 | 0.6718 |
0.7127 |
| AF-A0A133D074-F1-model_v4 | 10 | 700 | 10 | 760 | 0.6709 |
0.7238 |
| AF-Q8DNW5-F1-model_v4 | 8 | 696 | 6 | 803 | 0.6698 |
0.7373 |
| AF-K0F425-F1-model_v4 | 2 | 700 | 35 | 774 | 0.6634 |
0.7546 |
| AF-A0A0D2GPD4-F1-model_v4 | 12 | 646 | 1 | 663 | 0.6624 |
0.7211 |
| AF-A0A1C1D111-F1-model_v4 | 13 | 647 | 2 | 644 | 0.6509 |
0.6984 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| D9R842 | GH0 | 38 | 679 | 1 | 603 | 0.7213 |
0.7865 |
| AF-A0A6P1HFI7-F1-model_v4 | GH0 | 42 | 689 | 1 | 606 | 0.7209 |
0.7857 |
| AF-A0A1W1VWV3-F1-model_v4 | GH0 | 38 | 684 | 14 | 646 | 0.7164 |
0.7697 |
| A0A7W7NSF6 | GH65 | 9 | 698 | 1 | 739 | 0.7123 |
0.7555 |
| A0A7C7EEV8 | GH0 | 38 | 639 | 12 | 592 | 0.7054 |
0.7875 |
| AF-A0A2K9EXN8-F1-model_v4 | GH65 | 8 | 700 | 15 | 734 | 0.7044 |
0.7449 |
| AF-A0A7M2TBA6-F1-model_v4 | GH65 | 1 | 700 | 1 | 754 | 0.7031 |
0.7443 |
| AF-A0A2Z4JBC7-F1-model_v4 | GH65 | 9 | 700 | 9 | 752 | 0.7006 |
0.7478 |
| AF-A0A0M3RDN7-F1-model_v4 | GH65 | 9 | 700 | 1 | 760 | 0.7003 |
0.751 |
| AF-A0A2L2MVK5-F1-model_v4 | GH65 | 8 | 700 | 21 | 741 | 0.7001 |
0.7415 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QUQ65784.1 | GH94 | 7 | 698 | 8 | 689 | 0.7137 |
0.7419 |
| A0A7W7NSF6 | GH65 | 9 | 698 | 1 | 739 | 0.7123 |
0.7555 |
| A0A5C1QJ87 | GH65 | 8 | 700 | 3 | 755 | 0.7068 |
0.7549 |
| A0A7H0LGA1 | GH65 | 8 | 697 | 18 | 765 | 0.7015 |
0.756 |
| A0A410PNW6 | GH65 | 9 | 699 | 1 | 759 | 0.7 |
0.7512 |
| F0T0M0 | GH65 | 6 | 700 | 3 | 763 | 0.6998 |
0.7533 |
| S1P1S3 | GH65 | 9 | 699 | 1 | 746 | 0.6994 |
0.7451 |
| A0A2S2E6V4 | GH65 | 9 | 696 | 11 | 771 | 0.699 |
0.757 |
| UUM67919.1 | GH133 | 1 | 700 | 28 | 754 | 0.6962 |
0.7486 |
| A0A366ADA3 | GH133 | 1 | 700 | 31 | 753 | 0.696 |
0.7509 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7zo0-assembly1.cif.gz_A | 8 | 691 | 1 | 761 | 0.6827 |
0.739 |
| 7kmq-assembly1.cif.gz_B | 1 | 700 | 1 | 752 | 0.682 |
0.7206 |
| 7kmq-assembly1.cif.gz_A | 1 | 700 | 1 | 750 | 0.6814 |
0.7195 |
| 7znz-assembly1.cif.gz_A | 8 | 691 | 1 | 761 | 0.6812 |
0.7375 |
| 4ktp-assembly1.cif.gz_B | 9 | 699 | 10 | 761 | 0.6804 |
0.7318 |
| 4ktr-assembly4.cif.gz_H | 9 | 699 | 10 | 761 | 0.6795 |
0.731 |
| 1v7v-assembly1.cif.gz_A | 8 | 699 | 7 | 779 | 0.6779 |
0.7358 |
| 1h54-assembly1.cif.gz_A | 9 | 690 | 6 | 752 | 0.6739 |
0.7307 |
| 6w0p-assembly1.cif.gz_A | 9 | 697 | 10 | 752 | 0.6702 |
0.7206 |
| 6w0p-assembly2.cif.gz_C | 9 | 697 | 9 | 719 | 0.6689 |
0.7055 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-F1NZI4-F1-model_v4 | 1 | 699 | 8 | 691 | 0.7271 |
0.7585 |
| AF-Q54KX5-F1-model_v4 | 4 | 700 | 11 | 704 | 0.7113 |
0.739 |
| AF-Q32M88-F1-model_v4 | 9 | 700 | 5 | 720 | 0.7098 |
0.7485 |
| AF-Q8GRC3-F1-model_v4 | 9 | 700 | 1 | 763 | 0.6958 |
0.7485 |
| AF-A0JMP0-F1-model_v4 | 50 | 699 | 1 | 640 | 0.694 |
0.7458 |
| AF-A9KM56-F1-model_v4 | 9 | 697 | 4 | 756 | 0.6938 |
0.745 |
| AF-P9WN13-F1-model_v4 | 9 | 700 | 8 | 763 | 0.6931 |
0.7536 |
| AF-P9WN12-F1-model_v4 | 9 | 700 | 8 | 763 | 0.6925 |
0.7531 |
| AF-Q49736-F1-model_v4 | 9 | 700 | 8 | 763 | 0.6909 |
0.7538 |
| AF-Q9CID5-F1-model_v4 | 9 | 698 | 2 | 769 | 0.6871 |
0.743 |