Cluster: BrooksB_2017_SRR5405894_bin.8_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: galactan
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_01479
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_1279 | BrooksB_2017_SRR5405894_bin.8_k119_1279_25 | 27209 | 28483 | + | 3.A.1.1.2 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_1279 | BrooksB_2017_SRR5405894_bin.8_k119_1279_26 | 28574 | 29851 | + | 3.A.1.1.2 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_1279 | BrooksB_2017_SRR5405894_bin.8_k119_1279_27 | 29853 | 30710 | + | 3.A.1.1.2 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_1279 | BrooksB_2017_SRR5405894_bin.8_k119_1279_28 | 30717 | 32756 | + | GH42 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_1279_25
Type: TC
Location: 27209 - 28483 (+)
Type: TC
Location: 27209 - 28483 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_1279_26
Type: TC
Location: 28574 - 29851 (+)
Type: TC
Location: 28574 - 29851 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_1279_27
Type: TC
Location: 29853 - 30710 (+)
Type: TC
Location: 29853 - 30710 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_1279_28
Type: CAZyme
Location: 30717 - 32756 (+)
Type: CAZyme
Location: 30717 - 32756 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.