Cluster: BrooksB_2017_SRR5405894_bin.8_CGC27
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_2491 | BrooksB_2017_SRR5405894_bin.8_k119_2491_12 | 9574 | 12213 | - | GH106 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_2491 | BrooksB_2017_SRR5405894_bin.8_k119_2491_13 | 12218 | 13405 | - | Sugar_tr | MFS_1 |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_2491 | BrooksB_2017_SRR5405894_bin.8_k119_2491_14 | 13527 | 14501 | + | HTH_AraC |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_2491 | BrooksB_2017_SRR5405894_bin.8_k119_2491_15 | 14787 | 15422 | - | 2.A.115.2.15 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_2491 | BrooksB_2017_SRR5405894_bin.8_k119_2491_16 | 15403 | 16812 | - | 2.A.2.1.1 |
| TF | BrooksB_2017_SRR5405894_bin.8_k119_2491 | BrooksB_2017_SRR5405894_bin.8_k119_2491_17 | 16932 | 17801 | + | HTH_AraC | HTH_AraC |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_2491 | BrooksB_2017_SRR5405894_bin.8_k119_2491_18 | 17892 | 20114 | - | GH36 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2491_12
Type: CAZyme
Location: 9574 - 12213 (-)
Type: CAZyme
Location: 9574 - 12213 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2491_13
Type: pfam
Location: 12218 - 13405 (-)
Type: pfam
Location: 12218 - 13405 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2491_14
Type: TF
Location: 13527 - 14501 (+)
Type: TF
Location: 13527 - 14501 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2491_15
Type: TC
Location: 14787 - 15422 (-)
Type: TC
Location: 14787 - 15422 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2491_16
Type: TC
Location: 15403 - 16812 (-)
Type: TC
Location: 15403 - 16812 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2491_17
Type: TF
Location: 16932 - 17801 (+)
Type: TF
Location: 16932 - 17801 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2491_18
Type: CAZyme
Location: 17892 - 20114 (-)
Type: CAZyme
Location: 17892 - 20114 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.