Cluster: BrooksB_2017_SRR5405854_bin.5_CGC7
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: BrooksB_2017_SRR5405854_bin.5
- CGC Family ID: CGCFAM_00401
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405854_bin.5_k141_1019 | BrooksB_2017_SRR5405854_bin.5_k141_1019_1 | 3 | 794 | - | 3.A.1.1.20 |
| STP | BrooksB_2017_SRR5405854_bin.5_k141_1019 | BrooksB_2017_SRR5405854_bin.5_k141_1019_2 | 995 | 2323 | - | SBP_bac_1 |
| pfam | BrooksB_2017_SRR5405854_bin.5_k141_1019 | BrooksB_2017_SRR5405854_bin.5_k141_1019_3 | 2438 | 3136 | - | NanE |
| CAZyme | BrooksB_2017_SRR5405854_bin.5_k141_1019 | BrooksB_2017_SRR5405854_bin.5_k141_1019_4 | 3309 | 4412 | - | GH177 |
| TC | BrooksB_2017_SRR5405854_bin.5_k141_1019 | BrooksB_2017_SRR5405854_bin.5_k141_1019_5 | 4451 | 5284 | - | 3.A.1.1.25 |
| TC | BrooksB_2017_SRR5405854_bin.5_k141_1019 | BrooksB_2017_SRR5405854_bin.5_k141_1019_6 | 5284 | 6168 | - | 3.A.1.1.25 |
| STP | BrooksB_2017_SRR5405854_bin.5_k141_1019 | BrooksB_2017_SRR5405854_bin.5_k141_1019_7 | 6247 | 7584 | - | SBP_bac_1 |
| pfam | BrooksB_2017_SRR5405854_bin.5_k141_1019 | BrooksB_2017_SRR5405854_bin.5_k141_1019_8 | 7603 | 8055 | - | DUF386 |
| CAZyme | BrooksB_2017_SRR5405854_bin.5_k141_1019 | BrooksB_2017_SRR5405854_bin.5_k141_1019_9 | 8560 | 9540 | - | CE7 |
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_1019_1
Type: TC
Location: 3 - 794 (-)
Type: TC
Location: 3 - 794 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_1019_2
Type: STP
Location: 995 - 2323 (-)
Type: STP
Location: 995 - 2323 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_1019_3
Type: pfam
Location: 2438 - 3136 (-)
Type: pfam
Location: 2438 - 3136 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_1019_4
Type: CAZyme
Location: 3309 - 4412 (-)
Type: CAZyme
Location: 3309 - 4412 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_1019_5
Type: TC
Location: 4451 - 5284 (-)
Type: TC
Location: 4451 - 5284 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_1019_6
Type: TC
Location: 5284 - 6168 (-)
Type: TC
Location: 5284 - 6168 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_1019_7
Type: STP
Location: 6247 - 7584 (-)
Type: STP
Location: 6247 - 7584 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_1019_8
Type: pfam
Location: 7603 - 8055 (-)
Type: pfam
Location: 7603 - 8055 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_1019_9
Type: CAZyme
Location: 8560 - 9540 (-)
Type: CAZyme
Location: 8560 - 9540 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.