Cluster: BrooksB_2017_SRR5405894_bin.8_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: beta-glucan
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_00107
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_1333 | BrooksB_2017_SRR5405894_bin.8_k119_1333_27 | 23595 | 25088 | + | 3.A.1.2.20 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_1333 | BrooksB_2017_SRR5405894_bin.8_k119_1333_28 | 25069 | 26064 | + | 3.A.1.2.19 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_1333 | BrooksB_2017_SRR5405894_bin.8_k119_1333_29 | 26088 | 27266 | + | GH179 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_1333 | BrooksB_2017_SRR5405894_bin.8_k119_1333_30 | 27343 | 28254 | + | AP_endonuc_2 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_1333 | BrooksB_2017_SRR5405894_bin.8_k119_1333_31 | 28523 | 29668 | + | GH50 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_1333_27
Type: TC
Location: 23595 - 25088 (+)
Type: TC
Location: 23595 - 25088 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_1333_28
Type: TC
Location: 25069 - 26064 (+)
Type: TC
Location: 25069 - 26064 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_1333_29
Type: CAZyme
Location: 26088 - 27266 (+)
Type: CAZyme
Location: 26088 - 27266 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_1333_30
Type: pfam
Location: 27343 - 28254 (+)
Type: pfam
Location: 27343 - 28254 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_1333_31
Type: CAZyme
Location: 28523 - 29668 (+)
Type: CAZyme
Location: 28523 - 29668 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.