Cluster: BrooksB_2017_SRR5405854_bin.5_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405854_bin.5
- CGC Family ID: CGCFAM_01738
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405854_bin.5_k141_722 | BrooksB_2017_SRR5405854_bin.5_k141_722_3 | 2349 | 3329 | + | 9.B.146.1.6 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405854_bin.5_k141_722 | BrooksB_2017_SRR5405854_bin.5_k141_722_4 | 3658 | 3747 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | BrooksB_2017_SRR5405854_bin.5_k141_722 | BrooksB_2017_SRR5405854_bin.5_k141_722_5 | 3825 | 5930 | + | 3.A.9.1.2 |
| pfam | BrooksB_2017_SRR5405854_bin.5_k141_722 | BrooksB_2017_SRR5405854_bin.5_k141_722_6 | 5991 | 6473 | - | LuxS |
| pfam | BrooksB_2017_SRR5405854_bin.5_k141_722 | BrooksB_2017_SRR5405854_bin.5_k141_722_7 | 6568 | 8052 | - | DUF1846 | DUF1846_C |
| CAZyme | BrooksB_2017_SRR5405854_bin.5_k141_722 | BrooksB_2017_SRR5405854_bin.5_k141_722_8 | 8205 | 9815 | + | GH13_31 |
| TC | BrooksB_2017_SRR5405854_bin.5_k141_722 | BrooksB_2017_SRR5405854_bin.5_k141_722_9 | 9985 | 11952 | + | 3.A.1.5.25 |
| TC | BrooksB_2017_SRR5405854_bin.5_k141_722 | BrooksB_2017_SRR5405854_bin.5_k141_722_10 | 12179 | 14137 | + | 3.A.1.5.19 |
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_722_3
Type: TC
Location: 2349 - 3329 (+)
Type: TC
Location: 2349 - 3329 (+)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_722_4
Type:
Location: 3658 - 3747 (+)
Type:
Location: 3658 - 3747 (+)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_722_5
Type: TC
Location: 3825 - 5930 (+)
Type: TC
Location: 3825 - 5930 (+)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_722_6
Type: pfam
Location: 5991 - 6473 (-)
Type: pfam
Location: 5991 - 6473 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_722_7
Type: pfam
Location: 6568 - 8052 (-)
Type: pfam
Location: 6568 - 8052 (-)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_722_8
Type: CAZyme
Location: 8205 - 9815 (+)
Type: CAZyme
Location: 8205 - 9815 (+)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_722_9
Type: TC
Location: 9985 - 11952 (+)
Type: TC
Location: 9985 - 11952 (+)
Gene ID: BrooksB_2017_SRR5405854_bin.5_k141_722_10
Type: TC
Location: 12179 - 14137 (+)
Type: TC
Location: 12179 - 14137 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.