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Cluster: BrooksB_2017_SRR5405894_bin.8_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BrooksB_2017_SRR5405894_bin.8_k119_695 BrooksB_2017_SRR5405894_bin.8_k119_695_17 20431 20748 + 4.A.3.2.4
TC BrooksB_2017_SRR5405894_bin.8_k119_695 BrooksB_2017_SRR5405894_bin.8_k119_695_18 20772 21101 + 4.A.3.2.7
pfam BrooksB_2017_SRR5405894_bin.8_k119_695 BrooksB_2017_SRR5405894_bin.8_k119_695_19 21113 22255 + Acetyltransf_9 | SCP2_2 | Acetyltransf_17
TC BrooksB_2017_SRR5405894_bin.8_k119_695 BrooksB_2017_SRR5405894_bin.8_k119_695_20 22277 23536 + 4.A.3.2.2
CAZyme BrooksB_2017_SRR5405894_bin.8_k119_695 BrooksB_2017_SRR5405894_bin.8_k119_695_21 23624 25012 + GH1
CAZyme BrooksB_2017_SRR5405894_bin.8_k119_695 BrooksB_2017_SRR5405894_bin.8_k119_695_22 25033 26124 + GH170
TC BrooksB_2017_SRR5405894_bin.8_k119_695 BrooksB_2017_SRR5405894_bin.8_k119_695_23 26632 27273 + 3.A.1.3.12
TC BrooksB_2017_SRR5405894_bin.8_k119_695 BrooksB_2017_SRR5405894_bin.8_k119_695_24 27287 27922 + 3.A.1.3.2
TC BrooksB_2017_SRR5405894_bin.8_k119_695 BrooksB_2017_SRR5405894_bin.8_k119_695_25 27946 28773 + 3.A.1.3.15
TC BrooksB_2017_SRR5405894_bin.8_k119_695 BrooksB_2017_SRR5405894_bin.8_k119_695_26 28880 31282 + 3.A.12.1.1
TF BrooksB_2017_SRR5405894_bin.8_k119_695 BrooksB_2017_SRR5405894_bin.8_k119_695_27 31657 33603 + HTH_11 | Mga
TC BrooksB_2017_SRR5405894_bin.8_k119_695 BrooksB_2017_SRR5405894_bin.8_k119_695_28 33609 34070 + 4.A.2.1.6
TC BrooksB_2017_SRR5405894_bin.8_k119_695 BrooksB_2017_SRR5405894_bin.8_k119_695_29 34093 34404 + 4.A.2.1.10
TC BrooksB_2017_SRR5405894_bin.8_k119_695 BrooksB_2017_SRR5405894_bin.8_k119_695_30 34503 35594 + 4.A.2.1.10
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_17
Type: TC
Location: 20431 - 20748 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_18
Type: TC
Location: 20772 - 21101 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_19
Type: pfam
Location: 21113 - 22255 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_20
Type: TC
Location: 22277 - 23536 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_21
Type: CAZyme
Location: 23624 - 25012 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_22
Type: CAZyme
Location: 25033 - 26124 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_23
Type: TC
Location: 26632 - 27273 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_24
Type: TC
Location: 27287 - 27922 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_25
Type: TC
Location: 27946 - 28773 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_26
Type: TC
Location: 28880 - 31282 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_27
Type: TF
Location: 31657 - 33603 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_28
Type: TC
Location: 33609 - 34070 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_29
Type: TC
Location: 34093 - 34404 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_695_30
Type: TC
Location: 34503 - 35594 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Enterococcaceae
→
Genus
Enterococcus_A
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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