Cluster: BrooksB_2017_SRR5405894_bin.8_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: host glycan/beta-glucan
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- CGC Family ID: CGCFAM_00020
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405894_bin.8_k119_2246 | BrooksB_2017_SRR5405894_bin.8_k119_2246_87 | 83176 | 83658 | + | 4.A.1.1.14 |
| pfam | BrooksB_2017_SRR5405894_bin.8_k119_2246 | BrooksB_2017_SRR5405894_bin.8_k119_2246_88 | 83676 | 84521 | + | PRD | PRD | CAT_RBD |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_2246 | BrooksB_2017_SRR5405894_bin.8_k119_2246_89 | 84772 | 86202 | + | 4.A.1.2.11 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_2246 | BrooksB_2017_SRR5405894_bin.8_k119_2246_90 | 86206 | 87597 | + | GH1 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_2246 | BrooksB_2017_SRR5405894_bin.8_k119_2246_91 | 87765 | 89246 | + | CE20 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2246_87
Type: TC
Location: 83176 - 83658 (+)
Type: TC
Location: 83176 - 83658 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2246_88
Type: pfam
Location: 83676 - 84521 (+)
Type: pfam
Location: 83676 - 84521 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2246_89
Type: TC
Location: 84772 - 86202 (+)
Type: TC
Location: 84772 - 86202 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2246_90
Type: CAZyme
Location: 86206 - 87597 (+)
Type: CAZyme
Location: 86206 - 87597 (+)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2246_91
Type: CAZyme
Location: 87765 - 89246 (+)
Type: CAZyme
Location: 87765 - 89246 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.