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Genome Details

Selected Rep_genome_ID: VatanenT_2016_SRR4305041_bin.1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→
Species
Bacteroides sp900547205
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
VatanenT_2016_SRR4305041_bin.1 5,001,312 99.25% 0.495% Estonia Europe ELGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
VatanenT_2016_SRR4305041_bin.1_CGC40 CGCFAM_00001 Yes 7 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
VatanenT_2016_SRR4305041_bin.1_CGC72 CGCFAM_00001 Yes 5 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
VatanenT_2016_SRR4305041_bin.1_CGC28 CGCFAM_00017 Yes 10 4 fructan
VatanenT_2016_SRR4305041_bin.1_CGC71 CGCFAM_00043 Yes 8 2 alpha-glucan
VatanenT_2016_SRR4305041_bin.1_CGC56 CGCFAM_00059 Yes 8 2
VatanenT_2016_SRR4305041_bin.1_CGC41 CGCFAM_00136 Yes 11 4 pectin
VatanenT_2016_SRR4305041_bin.1_CGC39 CGCFAM_00164 Yes 3 1
VatanenT_2016_SRR4305041_bin.1_CGC50 CGCFAM_00212 Yes 16 9 arabinogalactan/pectin
VatanenT_2016_SRR4305041_bin.1_CGC35 CGCFAM_00256 Yes 5 2
VatanenT_2016_SRR4305041_bin.1_CGC55 CGCFAM_00256 Yes 16 3
VatanenT_2016_SRR4305041_bin.1_CGC54 CGCFAM_00304 Yes 6 1
VatanenT_2016_SRR4305041_bin.1_CGC75 CGCFAM_00363 Yes 12 4
VatanenT_2016_SRR4305041_bin.1_CGC64 CGCFAM_00646 Yes 10 4 arabinogalactan
VatanenT_2016_SRR4305041_bin.1_CGC7 CGCFAM_00647 Yes 6 3
VatanenT_2016_SRR4305041_bin.1_CGC12 CGCFAM_00720 Yes 10 3 host glycan
VatanenT_2016_SRR4305041_bin.1_CGC9 CGCFAM_00720 Yes 7 4 host glycan
VatanenT_2016_SRR4305041_bin.1_CGC25 CGCFAM_00985 Yes 12 6
VatanenT_2016_SRR4305041_bin.1_CGC23 CGCFAM_01124 Yes 14 6
VatanenT_2016_SRR4305041_bin.1_CGC31 CGCFAM_01310 Yes 8 3
VatanenT_2016_SRR4305041_bin.1_CGC63 CGCFAM_02304 Yes 4 1
VatanenT_2016_SRR4305041_bin.1_CGC68 CGCFAM_02718 Yes 6 2
VatanenT_2016_SRR4305041_bin.1_CGC20 CGCFAM_02743 Yes 12 7
VatanenT_2016_SRR4305041_bin.1_CGC69 CGCFAM_02933 Yes 6 1 host glycan
VatanenT_2016_SRR4305041_bin.1_CGC48 CGCFAM_03880 Yes 6 1
VatanenT_2016_SRR4305041_bin.1_CGC1 CGCFAM_03954 Yes 7 1
Top CAZyme Families