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Cluster: VatanenT_2016_SRR4305041_bin.1_CGC68

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC VatanenT_2016_SRR4305041_bin.1_k119_6601 VatanenT_2016_SRR4305041_bin.1_k119_6601_7 5684 8734 + 1.B.14.6.1
TC VatanenT_2016_SRR4305041_bin.1_k119_6601 VatanenT_2016_SRR4305041_bin.1_k119_6601_8 8768 10459 + 8.A.46.1.3
CAZyme VatanenT_2016_SRR4305041_bin.1_k119_6601 VatanenT_2016_SRR4305041_bin.1_k119_6601_9 10486 12027 + GH30_6
pfam VatanenT_2016_SRR4305041_bin.1_k119_6601 VatanenT_2016_SRR4305041_bin.1_k119_6601_10 12064 13491 + Big_2 | T2SS-T3SS_pil_N
CAZyme VatanenT_2016_SRR4305041_bin.1_k119_6601 VatanenT_2016_SRR4305041_bin.1_k119_6601_11 13560 14756 + GH130_1
TC VatanenT_2016_SRR4305041_bin.1_k119_6601 VatanenT_2016_SRR4305041_bin.1_k119_6601_12 15241 17121 + 2.A.21.3.8
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_6601_7
Type: TC
Location: 5684 - 8734 (+)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_6601_8
Type: TC
Location: 8768 - 10459 (+)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_6601_9
Type: CAZyme
Location: 10486 - 12027 (+)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_6601_10
Type: pfam
Location: 12064 - 13491 (+)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_6601_11
Type: CAZyme
Location: 13560 - 14756 (+)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_6601_12
Type: TC
Location: 15241 - 17121 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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