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Cluster: VatanenT_2016_SRR4305041_bin.1_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme VatanenT_2016_SRR4305041_bin.1_k119_1685 VatanenT_2016_SRR4305041_bin.1_k119_1685_5 4146 6473 + CBM32
pfam VatanenT_2016_SRR4305041_bin.1_k119_1685 VatanenT_2016_SRR4305041_bin.1_k119_1685_6 6483 7631 + F5_F8_type_C | Big_2
TC VatanenT_2016_SRR4305041_bin.1_k119_1685 VatanenT_2016_SRR4305041_bin.1_k119_1685_7 7815 11177 + 1.B.14.6.1
TC VatanenT_2016_SRR4305041_bin.1_k119_1685 VatanenT_2016_SRR4305041_bin.1_k119_1685_8 11190 13046 + 8.A.46.1.6
CAZyme VatanenT_2016_SRR4305041_bin.1_k119_1685 VatanenT_2016_SRR4305041_bin.1_k119_1685_9 13302 14420 + GH105
CAZyme VatanenT_2016_SRR4305041_bin.1_k119_1685 VatanenT_2016_SRR4305041_bin.1_k119_1685_10 14441 15343 + GH2
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_1685_5
Type: CAZyme
Location: 4146 - 6473 (+)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_1685_6
Type: pfam
Location: 6483 - 7631 (+)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_1685_7
Type: TC
Location: 7815 - 11177 (+)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_1685_8
Type: TC
Location: 11190 - 13046 (+)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_1685_9
Type: CAZyme
Location: 13302 - 14420 (+)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_1685_10
Type: CAZyme
Location: 14441 - 15343 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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