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Genome Details

Selected Rep_genome_ID: SPMP40_bin.50
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
SPMP40_bin.50 3,250,225 96.42% 1.49% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
SPMP40_bin.50_CGC30 CGCFAM_00001 Yes 7 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
SPMP40_bin.50_CGC37 CGCFAM_00001 Yes 9 4 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
SPMP40_bin.50_CGC41 CGCFAM_00001 Yes 4 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
SPMP40_bin.50_CGC28 CGCFAM_00016 Yes 7 1 host glycan
SPMP40_bin.50_CGC8 CGCFAM_00016 Yes 6 1 host glycan
SPMP40_bin.50_CGC11 CGCFAM_00025 Yes 8 2 pectin/alpha-glucan
SPMP40_bin.50_CGC14 CGCFAM_00033 Yes 9 3
SPMP40_bin.50_CGC7 CGCFAM_00048 Yes 8 2
SPMP40_bin.50_CGC25 CGCFAM_00059 Yes 11 1
SPMP40_bin.50_CGC38 CGCFAM_00061 Yes 4 1
SPMP40_bin.50_CGC52 CGCFAM_00352 Yes 7 1
SPMP40_bin.50_CGC24 CGCFAM_00367 Yes 5 1
SPMP40_bin.50_CGC21 CGCFAM_00437 Yes 9 1
SPMP40_bin.50_CGC50 CGCFAM_00536 Yes 5 2
SPMP40_bin.50_CGC17 CGCFAM_00755 Yes 5 1
SPMP40_bin.50_CGC4 CGCFAM_00941 Yes 5 1
SPMP40_bin.50_CGC49 CGCFAM_01908 Yes 13 9
SPMP40_bin.50_CGC42 CGCFAM_02718 Yes 5 2
SPMP40_bin.50_CGC48 CGCFAM_03563 Yes 4 1
SPMP40_bin.50_CGC39 CGCFAM_09593 Yes 9 1
SPMP40_bin.50_CGC27 CGCFAM_09596 Yes 17 6
SPMP40_bin.50_CGC29 CGCFAM_09597 Yes 6 3
SPMP40_bin.50_CGC35 CGCFAM_09598 Yes 11 3
Top CAZyme Families