Cluster: SPMP40_bin.50_CGC28
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: SPMP40_bin.50
- CGC Family ID: CGCFAM_00016
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_30 | opera_contig_30_120 | 137072 | 139018 | + | 3.A.1.120.6 |
| peptidase | opera_contig_30 | opera_contig_30_121 | 139079 | 141115 | + | M13.017 |
| pfam | opera_contig_30 | opera_contig_30_122 | 141427 | 142566 | - | BT_3987-like_N | Laminin_G_3 |
| CAZyme | opera_contig_30 | opera_contig_30_123 | 142599 | 143705 | - | GH18 |
| TC | opera_contig_30 | opera_contig_30_124 | 143733 | 145337 | - | 8.A.46.2.2 |
| TC | opera_contig_30 | opera_contig_30_125 | 145345 | 147708 | - | 1.B.14.6.13 |
| TC | opera_contig_30 | opera_contig_30_126 | 147722 | 148435 | - | 1.B.14.6.2 |
Gene ID: opera_contig_30_120
Type: TC
Location: 137072 - 139018 (+)
Type: TC
Location: 137072 - 139018 (+)
Gene ID: opera_contig_30_121
Type: peptidase
Location: 139079 - 141115 (+)
Type: peptidase
Location: 139079 - 141115 (+)
Gene ID: opera_contig_30_122
Type: pfam
Location: 141427 - 142566 (-)
Type: pfam
Location: 141427 - 142566 (-)
Gene ID: opera_contig_30_123
Type: CAZyme
Location: 142599 - 143705 (-)
Type: CAZyme
Location: 142599 - 143705 (-)
Gene ID: opera_contig_30_124
Type: TC
Location: 143733 - 145337 (-)
Type: TC
Location: 143733 - 145337 (-)
Gene ID: opera_contig_30_125
Type: TC
Location: 145345 - 147708 (-)
Type: TC
Location: 145345 - 147708 (-)
Gene ID: opera_contig_30_126
Type: TC
Location: 147722 - 148435 (-)
Type: TC
Location: 147722 - 148435 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.