Cluster: SPMP40_bin.50_CGC27
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 6
- Substrate:
- Genome ID: SPMP40_bin.50
- CGC Family ID: CGCFAM_09596
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_30 | opera_contig_30_31 | 37278 | 39083 | + | 4.C.1.1.14 |
| pfam | opera_contig_30 | opera_contig_30_32 | 39103 | 39594 | + | Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8 |
| NULL(UNKNOWN) | opera_contig_30 | opera_contig_30_33 | 39977 | 40072 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | opera_contig_30 | opera_contig_30_34 | 40074 | 41726 | - | 8.A.43.1.3 |
| CAZyme | opera_contig_30 | opera_contig_30_35 | 42531 | 44762 | - | GH92 |
| CAZyme | opera_contig_30 | opera_contig_30_36 | 44909 | 45880 | - | GH130_2 |
| pfam | opera_contig_30 | opera_contig_30_37 | 45909 | 47270 | - | MFS_1 | MFS_1 |
| CAZyme | opera_contig_30 | opera_contig_30_38 | 47681 | 49963 | - | GH92 |
| CAZyme | opera_contig_30 | opera_contig_30_39 | 49974 | 52253 | - | GH92 |
| CAZyme | opera_contig_30 | opera_contig_30_40 | 52295 | 54520 | - | GH92 |
| TC | opera_contig_30 | opera_contig_30_41 | 54987 | 58181 | + | 1.B.14.6.13 |
| TC | opera_contig_30 | opera_contig_30_42 | 58194 | 59768 | + | 8.A.46.2.2 |
| pfam | opera_contig_30 | opera_contig_30_43 | 59802 | 60911 | + | GH18_BT1044-like |
| sulfatase | opera_contig_30 | opera_contig_30_44 | 60922 | 62091 | + | S1_48 |
| CAZyme | opera_contig_30 | opera_contig_30_45 | 62120 | 63538 | + | GH18 |
| NULL(UNKNOWN) | opera_contig_30 | opera_contig_30_46 | 63556 | 65028 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | opera_contig_30 | opera_contig_30_47 | 65448 | 66797 | + | 2.A.66.1.45 |
Gene ID: opera_contig_30_31
Type: TC
Location: 37278 - 39083 (+)
Type: TC
Location: 37278 - 39083 (+)
Gene ID: opera_contig_30_32
Type: pfam
Location: 39103 - 39594 (+)
Type: pfam
Location: 39103 - 39594 (+)
Gene ID: opera_contig_30_33
Type:
Location: 39977 - 40072 (-)
Type:
Location: 39977 - 40072 (-)
Gene ID: opera_contig_30_34
Type: TC
Location: 40074 - 41726 (-)
Type: TC
Location: 40074 - 41726 (-)
Gene ID: opera_contig_30_35
Type: CAZyme
Location: 42531 - 44762 (-)
Type: CAZyme
Location: 42531 - 44762 (-)
Gene ID: opera_contig_30_36
Type: CAZyme
Location: 44909 - 45880 (-)
Type: CAZyme
Location: 44909 - 45880 (-)
Gene ID: opera_contig_30_37
Type: pfam
Location: 45909 - 47270 (-)
Type: pfam
Location: 45909 - 47270 (-)
Gene ID: opera_contig_30_38
Type: CAZyme
Location: 47681 - 49963 (-)
Type: CAZyme
Location: 47681 - 49963 (-)
Gene ID: opera_contig_30_39
Type: CAZyme
Location: 49974 - 52253 (-)
Type: CAZyme
Location: 49974 - 52253 (-)
Gene ID: opera_contig_30_40
Type: CAZyme
Location: 52295 - 54520 (-)
Type: CAZyme
Location: 52295 - 54520 (-)
Gene ID: opera_contig_30_41
Type: TC
Location: 54987 - 58181 (+)
Type: TC
Location: 54987 - 58181 (+)
Gene ID: opera_contig_30_42
Type: TC
Location: 58194 - 59768 (+)
Type: TC
Location: 58194 - 59768 (+)
Gene ID: opera_contig_30_43
Type: pfam
Location: 59802 - 60911 (+)
Type: pfam
Location: 59802 - 60911 (+)
Gene ID: opera_contig_30_44
Type: sulfatase
Location: 60922 - 62091 (+)
Type: sulfatase
Location: 60922 - 62091 (+)
Gene ID: opera_contig_30_45
Type: CAZyme
Location: 62120 - 63538 (+)
Type: CAZyme
Location: 62120 - 63538 (+)
Gene ID: opera_contig_30_46
Type:
Location: 63556 - 65028 (+)
Type:
Location: 63556 - 65028 (+)
Gene ID: opera_contig_30_47
Type: TC
Location: 65448 - 66797 (+)
Type: TC
Location: 65448 - 66797 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.