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Cluster: SPMP40_bin.50_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_71 opera_contig_71_38 40702 44274 + 1.B.14.6.1
pfam opera_contig_71 opera_contig_71_39 44299 46086 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) opera_contig_71 opera_contig_71_40 46180 47973 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme opera_contig_71 opera_contig_71_41 48025 50532 + GH141
CAZyme opera_contig_71 opera_contig_71_42 50557 52743 + GH141
sulfatase opera_contig_71 opera_contig_71_43 52743 53483 + S1_15
CAZyme opera_contig_71 opera_contig_71_44 53915 55798 + GH163
CAZyme opera_contig_71 opera_contig_71_45 55834 57735 - GH20
TC opera_contig_71 opera_contig_71_46 57834 59876 + 1.B.14.6.1
Gene ID: opera_contig_71_38
Type: TC
Location: 40702 - 44274 (+)
Gene ID: opera_contig_71_39
Type: pfam
Location: 44299 - 46086 (+)
Gene ID: opera_contig_71_40
Type:
Location: 46180 - 47973 (+)
Gene ID: opera_contig_71_41
Type: CAZyme
Location: 48025 - 50532 (+)
Gene ID: opera_contig_71_42
Type: CAZyme
Location: 50557 - 52743 (+)
Gene ID: opera_contig_71_43
Type: sulfatase
Location: 52743 - 53483 (+)
Gene ID: opera_contig_71_44
Type: CAZyme
Location: 53915 - 55798 (+)
Gene ID: opera_contig_71_45
Type: CAZyme
Location: 55834 - 57735 (-)
Gene ID: opera_contig_71_46
Type: TC
Location: 57834 - 59876 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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