PROTEIN: opera_contig_71_40
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Protein File & Metadata
Source:
opera_contig_71_40.pdb
Genome ID:
Protein ID:
opera_contig_71_40
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Protein Sequence
MNRICYAVFL WAMLMMASCA NQAYNDGYIT YAPVELTPEE KEILLEKIKA NESNYDPEDR 60 MITQVLRGWN YHTDASSGTF HDTRGSLFYA VDLFDSGELQ YRQRAVDIVD KVISLQDTVA 120 QSPSCGVWPY FEEEPLGVKR SPIDYNWADF NAVCLLDIYM GHKDELSSVL QEKIKHSLIL 180 AAKAVQKRNC EPGYTNIAIM GTYVTYMVSR LLDLPEMQKY ADSRLRAFYQ YTKKEKGFTE 240 YNSPTYTIVA LDELNRMQRH IVEPKAKKMI DELYEMGWDM IARHYHQPTG QWVGPHSRSY 300 NTLTDATFYG LLKQASNGKI DLGVEKARGD VKMRHHIPER LLPYFLNPEY PRVETDVFEV 360 NEPQIKGYTY LTDKYTISTA SRSSMWNQRR PLTAYWGRVQ NPHYLQVRFL HDFYDFSTVY 420 MYTQQKANSV LAAMNFGTDG GDKHITIGCI KDGKFKAGDL RIRFELGNIQ KWEGKLPSHE 480 DIPFVVEAEG MKIALQLCKA KFGNLKGHWE QGWDEKNAWI DYVIYIGPEK EFDLTKMDEA 540 VYAFALSVGT EADCAAMEGV KCTVSDRMLH ASWNDLSVDV SVKPSEKPVK AVSQWYY 597
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9UL01-F1-model_v4 | 22 | 597 | 34 | 859 | 0.4906 |
0.6276 |
| AF-B5DF19-F1-model_v4 | 19 | 597 | 39 | 857 | 0.4885 |
0.6228 |
| AF-D3ZYE3-F1-model_v4 | 19 | 580 | 54 | 717 | 0.4651 |
0.6562 |
| AF-Q8IZU8-F1-model_v4 | 18 | 579 | 57 | 722 | 0.4583 |
0.6475 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1B2DNQ4-F1-model_v4 | PL17_1 | 21 | 580 | 1 | 670 | 0.596 |
0.6839 |
| A0A737I0L0 | PL17_1 | 20 | 579 | 1 | 643 | 0.5947 |
0.6736 |
| AF-A0A6G9RJR8-F1-model_v4 | PL17_1 | 20 | 579 | 1 | 657 | 0.5877 |
0.6721 |
| AF-A0A0H3P0Q8-F1-model_v4 | PL17_1 | 19 | 579 | 1 | 668 | 0.5876 |
0.6735 |
| AF-A0A0U1QX47-F1-model_v4 | PL17_1 | 19 | 578 | 1 | 660 | 0.5876 |
0.6739 |
| AF-A0A0F7HDH9-F1-model_v4 | PL17_1 | 19 | 578 | 1 | 659 | 0.5874 |
0.6738 |
| AF-A0A7U4K2R0-F1-model_v4 | PL17_1 | 20 | 579 | 1 | 668 | 0.5867 |
0.6742 |
| AF-A0A3G2IBE8-F1-model_v4 | PL17_1 | 21 | 579 | 1 | 659 | 0.5867 |
0.6751 |
| AF-E3G3T6-F1-model_v4 | PL17_1 | 22 | 577 | 1 | 644 | 0.5867 |
0.666 |
| AF-A1JIZ0-F1-model_v4 | PL17_1 | 20 | 577 | 2 | 665 | 0.5867 |
0.6757 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1Y0IGA2 | PL12 | 18 | 579 | 2 | 642 | 0.5994 |
0.6722 |
| A0A1B2DNQ4 | PL17_1 | 21 | 580 | 1 | 670 | 0.596 |
0.6839 |
| A0A737I0L0 | PL17_1 | 20 | 579 | 1 | 643 | 0.5947 |
0.6736 |
| A0A8J8SCT1 | PL12 | 17 | 579 | 10 | 643 | 0.5908 |
0.6651 |
| C6XTA3 | PL37 | 36 | 552 | 28 | 634 | 0.5867 |
0.7021 |
| A0A0F7R713 | PL17 | 21 | 552 | 4 | 642 | 0.5847 |
0.6881 |
| A0A2V2YSV0 | PL12 | 17 | 579 | 17 | 647 | 0.5845 |
0.6601 |
| A0A413X139 | PL12 | 20 | 578 | 1 | 652 | 0.5829 |
0.6646 |
| A0A857EWU1 | PL17_1 | 20 | 579 | 2 | 682 | 0.5816 |
0.6738 |
| A0A3G4VHF0 | PL17_1 | 20 | 578 | 1 | 659 | 0.5815 |
0.6717 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2wda-assembly1.cif.gz_A | 19 | 591 | 1 | 730 | 0.5711 |
0.6681 |
| 2e24-assembly1.cif.gz_A | 19 | 590 | 1 | 700 | 0.562 |
0.6627 |
| 1j0n-assembly1.cif.gz_A | 19 | 589 | 1 | 699 | 0.5606 |
0.6611 |
| 6lja-assembly1.cif.gz_A | 21 | 592 | 141 | 841 | 0.5478 |
0.6737 |
| 6ljl-assembly1.cif.gz_A | 22 | 592 | 141 | 841 | 0.5454 |
0.6712 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-T2KMH5-F1-model_v4 | 35 | 552 | 34 | 637 | 0.552 |
0.6625 |
| AF-Q9UL01-F1-model_v4 | 22 | 597 | 34 | 859 | 0.4906 |
0.6276 |
| AF-Q8IZU8-F1-model_v4 | 18 | 579 | 57 | 722 | 0.4583 |
0.6475 |