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Cluster: SPMP40_bin.50_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_7 opera_contig_7_28 36407 39589 - 1.B.14.6.1
pfam opera_contig_7 opera_contig_7_29 39871 40983 - SusE | SusF_SusE
TC opera_contig_7 opera_contig_7_30 41033 42700 - 8.A.46.1.1
TC opera_contig_7 opera_contig_7_31 42722 45742 - 1.B.14.6.1
CAZyme opera_contig_7 opera_contig_7_32 45973 48153 - GH97
CAZyme opera_contig_7 opera_contig_7_33 48335 50164 - GH13_46
pfam opera_contig_7 opera_contig_7_34 50372 52012 + DUF6377
TC opera_contig_7 opera_contig_7_35 52044 53417 + 2.A.2.6.2
Gene ID: opera_contig_7_28
Type: TC
Location: 36407 - 39589 (-)
Gene ID: opera_contig_7_29
Type: pfam
Location: 39871 - 40983 (-)
Gene ID: opera_contig_7_30
Type: TC
Location: 41033 - 42700 (-)
Gene ID: opera_contig_7_31
Type: TC
Location: 42722 - 45742 (-)
Gene ID: opera_contig_7_32
Type: CAZyme
Location: 45973 - 48153 (-)
Gene ID: opera_contig_7_33
Type: CAZyme
Location: 48335 - 50164 (-)
Gene ID: opera_contig_7_34
Type: pfam
Location: 50372 - 52012 (+)
Gene ID: opera_contig_7_35
Type: TC
Location: 52044 - 53417 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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