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Cluster: SPMP40_bin.50_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_10 opera_contig_10_143 191596 192858 - 3.D.5.1.1
TC opera_contig_10 opera_contig_10_144 192884 193507 - 3.D.5.1.1
TC opera_contig_10 opera_contig_10_145 193526 194164 - 3.D.5.1.1
pfam opera_contig_10 opera_contig_10_146 194180 194860 - FMN_bind
TC opera_contig_10 opera_contig_10_147 194874 196037 - 3.D.5.1.1
pfam opera_contig_10 opera_contig_10_148 196147 197496 - NQRA_N | NQRA_SLBB | NQRA_2nd
TC opera_contig_10 opera_contig_10_149 197808 199433 - 8.A.46.1.1
TC opera_contig_10 opera_contig_10_150 199444 202185 - 1.B.14.6.1
CAZyme opera_contig_10 opera_contig_10_151 202538 203329 - GH16_3
Gene ID: opera_contig_10_143
Type: TC
Location: 191596 - 192858 (-)
Gene ID: opera_contig_10_144
Type: TC
Location: 192884 - 193507 (-)
Gene ID: opera_contig_10_145
Type: TC
Location: 193526 - 194164 (-)
Gene ID: opera_contig_10_146
Type: pfam
Location: 194180 - 194860 (-)
Gene ID: opera_contig_10_147
Type: TC
Location: 194874 - 196037 (-)
Gene ID: opera_contig_10_148
Type: pfam
Location: 196147 - 197496 (-)
Gene ID: opera_contig_10_149
Type: TC
Location: 197808 - 199433 (-)
Gene ID: opera_contig_10_150
Type: TC
Location: 199444 - 202185 (-)
Gene ID: opera_contig_10_151
Type: CAZyme
Location: 202538 - 203329 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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