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Cluster: SPMP40_bin.50_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_4 opera_contig_4_107 132728 134041 - 9.B.126.2.2
TC opera_contig_4 opera_contig_4_108 134694 136193 + 9.B.160.1.10
CAZyme opera_contig_4 opera_contig_4_109 136585 137844 - GH23
pfam opera_contig_4 opera_contig_4_110 137848 138669 - DUF5683
pfam opera_contig_4 opera_contig_4_111 138682 139575 - ParBc | HTH_ParB | ParB_dimer
TC opera_contig_4 opera_contig_4_112 139681 140442 - 8.A.3.2.3
pfam opera_contig_4 opera_contig_4_113 140705 141472 + SurE
CAZyme opera_contig_4 opera_contig_4_114 141469 142602 + GT19
Gene ID: opera_contig_4_107
Type: TC
Location: 132728 - 134041 (-)
Gene ID: opera_contig_4_108
Type: TC
Location: 134694 - 136193 (+)
Gene ID: opera_contig_4_109
Type: CAZyme
Location: 136585 - 137844 (-)
Gene ID: opera_contig_4_110
Type: pfam
Location: 137848 - 138669 (-)
Gene ID: opera_contig_4_111
Type: pfam
Location: 138682 - 139575 (-)
Gene ID: opera_contig_4_112
Type: TC
Location: 139681 - 140442 (-)
Gene ID: opera_contig_4_113
Type: pfam
Location: 140705 - 141472 (+)
Gene ID: opera_contig_4_114
Type: CAZyme
Location: 141469 - 142602 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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