dbCAN Logo

Cluster: SPMP40_bin.50_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_7 opera_contig_7_193 245227 246681 + 2.A.66.2.23
NULL(UNKNOWN) opera_contig_7 opera_contig_7_194 246678 247604 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) opera_contig_7 opera_contig_7_195 247616 248620 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme opera_contig_7 opera_contig_7_196 248641 249537 + GT2
pfam opera_contig_7 opera_contig_7_197 249534 250445 + Glycos_transf_2
NULL(UNKNOWN) opera_contig_7 opera_contig_7_198 250616 251110 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme opera_contig_7 opera_contig_7_199 251995 253257 + GT4
CAZyme opera_contig_7 opera_contig_7_200 253250 253999 + GT2
TC opera_contig_7 opera_contig_7_201 254106 256598 - 9.B.144.1.4
Gene ID: opera_contig_7_193
Type: TC
Location: 245227 - 246681 (+)
Gene ID: opera_contig_7_194
Type:
Location: 246678 - 247604 (+)
Gene ID: opera_contig_7_195
Type:
Location: 247616 - 248620 (+)
Gene ID: opera_contig_7_196
Type: CAZyme
Location: 248641 - 249537 (+)
Gene ID: opera_contig_7_197
Type: pfam
Location: 249534 - 250445 (+)
Gene ID: opera_contig_7_198
Type:
Location: 250616 - 251110 (-)
Gene ID: opera_contig_7_199
Type: CAZyme
Location: 251995 - 253257 (+)
Gene ID: opera_contig_7_200
Type: CAZyme
Location: 253250 - 253999 (+)
Gene ID: opera_contig_7_201
Type: TC
Location: 254106 - 256598 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List