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Genome Details

Selected Rep_genome_ID: Rep_490
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→
Species
Bacteroides thetaiotaomicron
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A58.bin_6 6,031,310 99.46% 0.08% China(Inner Mongolia) Asia IMGG
BF194_bin.5 6,057,052 99.41% 0.08% NA Africa H3AfricaPhase2
CGMR068028 5,720,273 99.14% 0.35% China Asia CGMR
Rep_490 6,220,636 99.4144% 0.0809062% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_490_CGC75 CGCFAM_00001 Yes 6 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
PUL0470_Rep_490_C1 CGCFAM_00016 Yes 6 1 host glycan
Rep_490_CGC102 CGCFAM_00016 Yes 9 2 host glycan
Rep_490_CGC49 CGCFAM_00016 Yes 5 1 host glycan
Rep_490_CGC93 CGCFAM_00016 Yes 6 2 host glycan
PUL0008_Rep_490_C1 CGCFAM_00017 Yes 10 2 fructan
Rep_490_CGC8 CGCFAM_00017 Yes 13 5 fructan
Rep_490_CGC107 CGCFAM_00018 Yes 13 5
Rep_490_CGC5 CGCFAM_00018 Yes 9 3
Rep_490_CGC87 CGCFAM_00029 Yes 10 3
Rep_490_CGC57 CGCFAM_00030 Yes 4 1
Rep_490_CGC92 CGCFAM_00033 Yes 9 6
Rep_490_CGC30 CGCFAM_00043 Yes 12 6 alpha-glucan
Rep_490_CGC35 CGCFAM_00062 Yes 10 5 beta-glucan
Rep_490_CGC39 CGCFAM_00095 Yes 5 2
Rep_490_CGC23 CGCFAM_00109 Yes 14 6 host glycan
Rep_490_CGC3 CGCFAM_00110 Yes 9 4 pectin/host glycan
Rep_490_CGC27 CGCFAM_00147 Yes 3 2
PUL0251_Rep_490_C1 CGCFAM_00183 Yes 7 1 host glycan
Rep_490_CGC29 CGCFAM_00183 Yes 4 1 pectin/host glycan
Rep_490_CGC42 CGCFAM_00183 Yes 12 4 pectin/host glycan
Rep_490_CGC62 CGCFAM_00183 Yes 9 2 pectin/host glycan
Rep_490_CGC94 CGCFAM_00212 Yes 30 14 arabinogalactan/pectin
Rep_490_CGC70 CGCFAM_00229 Yes 5 1
Rep_490_CGC79 CGCFAM_00251 Yes 5 2
Top CAZyme Families