Cluster: PUL0008_Rep_490_C1
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate: fructan
- Genome ID: Rep_490
- CGC Family ID: CGCFAM_00017
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0008_Rep_490_C1 | Rep_490_c_2_435 | 514180 | 516933 | - | HTH_AraC |
| pfam | PUL0008_Rep_490_C1 | Rep_490_c_2_436 | 517266 | 518384 | - | MORN_2 | MORN_2 |
| TF | PUL0008_Rep_490_C1 | Rep_490_c_2_437 | 518781 | 519668 | - | 0039384 |
| TC | PUL0008_Rep_490_C1 | Rep_490_c_2_438 | 519703 | 520872 | - | 2.A.1.7.17 |
| CAZyme | PUL0008_Rep_490_C1 | Rep_490_c_2_439 | 521152 | 522981 | - | GH32 |
| CAZyme | PUL0008_Rep_490_C1 | Rep_490_c_2_440 | 523111 | 524682 | - | GH32 |
| pfam | PUL0008_Rep_490_C1 | Rep_490_c_2_441 | 524698 | 526083 | - | DUF4960 |
| pfam | PUL0008_Rep_490_C1 | Rep_490_c_2_442 | 526110 | 527822 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0008_Rep_490_C1 | Rep_490_c_2_443 | 527850 | 530963 | - | 1.B.14.6.1 |
| pfam | PUL0008_Rep_490_C1 | Rep_490_c_2_445 | 531403 | 532275 | + | Aldose_epim |
Gene ID: Rep_490_c_2_435
Type: TF
Location: 514180 - 516933 (-)
Type: TF
Location: 514180 - 516933 (-)
Gene ID: Rep_490_c_2_436
Type: pfam
Location: 517266 - 518384 (-)
Type: pfam
Location: 517266 - 518384 (-)
Gene ID: Rep_490_c_2_437
Type: TF
Location: 518781 - 519668 (-)
Type: TF
Location: 518781 - 519668 (-)
Gene ID: Rep_490_c_2_438
Type: TC
Location: 519703 - 520872 (-)
Type: TC
Location: 519703 - 520872 (-)
Gene ID: Rep_490_c_2_439
Type: CAZyme
Location: 521152 - 522981 (-)
Type: CAZyme
Location: 521152 - 522981 (-)
Gene ID: Rep_490_c_2_440
Type: CAZyme
Location: 523111 - 524682 (-)
Type: CAZyme
Location: 523111 - 524682 (-)
Gene ID: Rep_490_c_2_441
Type: pfam
Location: 524698 - 526083 (-)
Type: pfam
Location: 524698 - 526083 (-)
Gene ID: Rep_490_c_2_442
Type: pfam
Location: 526110 - 527822 (-)
Type: pfam
Location: 526110 - 527822 (-)
Gene ID: Rep_490_c_2_443
Type: TC
Location: 527850 - 530963 (-)
Type: TC
Location: 527850 - 530963 (-)
Gene ID: Rep_490_c_2_445
Type: pfam
Location: 531403 - 532275 (+)
Type: pfam
Location: 531403 - 532275 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Composition
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