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Cluster: Rep_490_CGC102

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_490_c_4 Rep_490_c_4_144 166951 168267 + 2.A.1.7.5
TF Rep_490_c_4 Rep_490_c_4_145 168454 169005 + GerE
STP Rep_490_c_4 Rep_490_c_4_146 169065 170051 + FecR
TC Rep_490_c_4 Rep_490_c_4_147 170249 173581 + 1.B.14.6.13
TC Rep_490_c_4 Rep_490_c_4_148 173595 175190 + 8.A.46.2.2
pfam Rep_490_c_4 Rep_490_c_4_149 175214 176197 + GH18_BT1044-like
pfam Rep_490_c_4 Rep_490_c_4_150 176249 177538 + BT_3987-like_N | Laminin_G_3
CAZyme Rep_490_c_4 Rep_490_c_4_151 177566 179092 + GH18
CAZyme Rep_490_c_4 Rep_490_c_4_152 179289 180209 + GH18
Gene ID: Rep_490_c_4_144
Type: TC
Location: 166951 - 168267 (+)
Gene ID: Rep_490_c_4_145
Type: TF
Location: 168454 - 169005 (+)
Gene ID: Rep_490_c_4_146
Type: STP
Location: 169065 - 170051 (+)
Gene ID: Rep_490_c_4_147
Type: TC
Location: 170249 - 173581 (+)
Gene ID: Rep_490_c_4_148
Type: TC
Location: 173595 - 175190 (+)
Gene ID: Rep_490_c_4_149
Type: pfam
Location: 175214 - 176197 (+)
Gene ID: Rep_490_c_4_150
Type: pfam
Location: 176249 - 177538 (+)
Gene ID: Rep_490_c_4_151
Type: CAZyme
Location: 177566 - 179092 (+)
Gene ID: Rep_490_c_4_152
Type: CAZyme
Location: 179289 - 180209 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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