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Cluster: Rep_490_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_490_c_2 Rep_490_c_2_297 338453 341905 + 1.B.14.6.1
pfam Rep_490_c_2 Rep_490_c_2_298 341919 343775 + SusD_RagB | SusD-like_3
CAZyme Rep_490_c_2 Rep_490_c_2_299 344068 345627 + GH20
sulfatase Rep_490_c_2 Rep_490_c_2_300 345641 347143 + S1_20
TC Rep_490_c_2 Rep_490_c_2_301 347310 348485 - 1.A.23.4.5
sulfatase Rep_490_c_2 Rep_490_c_2_302 348620 350167 - S1_15
CAZyme Rep_490_c_2 Rep_490_c_2_303 350254 352074 - GH29
CAZyme Rep_490_c_2 Rep_490_c_2_304 352239 355310 - GH2
CAZyme Rep_490_c_2 Rep_490_c_2_305 355336 357666 - GH20
Gene ID: Rep_490_c_2_297
Type: TC
Location: 338453 - 341905 (+)
Gene ID: Rep_490_c_2_298
Type: pfam
Location: 341919 - 343775 (+)
Gene ID: Rep_490_c_2_299
Type: CAZyme
Location: 344068 - 345627 (+)
Gene ID: Rep_490_c_2_300
Type: sulfatase
Location: 345641 - 347143 (+)
Gene ID: Rep_490_c_2_301
Type: TC
Location: 347310 - 348485 (-)
Gene ID: Rep_490_c_2_302
Type: sulfatase
Location: 348620 - 350167 (-)
Gene ID: Rep_490_c_2_303
Type: CAZyme
Location: 350254 - 352074 (-)
Gene ID: Rep_490_c_2_304
Type: CAZyme
Location: 352239 - 355310 (-)
Gene ID: Rep_490_c_2_305
Type: CAZyme
Location: 355336 - 357666 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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