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Cluster: Rep_490_CGC87

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_490_c_2 Rep_490_c_2_3706 4905263 4906441 + GT4
NULL(UNKNOWN) Rep_490_c_2 Rep_490_c_2_3707 4906438 4907079 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_490_c_2 Rep_490_c_2_3708 4907076 4908227 + GT4
TC Rep_490_c_2 Rep_490_c_2_3709 4908217 4910019 + 9.B.97.5.1
CAZyme Rep_490_c_2 Rep_490_c_2_3710 4910080 4911282 + GT4
TC Rep_490_c_2 Rep_490_c_2_3711 4911305 4911931 + 9.B.18.1.3
pfam Rep_490_c_2 Rep_490_c_2_3712 4911993 4913066 + FemAB | Acetyltransf_6
pfam Rep_490_c_2 Rep_490_c_2_3713 4913074 4914408 + Aminotran_1_2 | DegT_DnrJ_EryC1 | DegT_DnrJ_EryC1
TC Rep_490_c_2 Rep_490_c_2_3714 4914622 4915416 + 1.B.18.3.3
TC Rep_490_c_2 Rep_490_c_2_3715 4915429 4917876 + 8.A.3.3.4
Gene ID: Rep_490_c_2_3706
Type: CAZyme
Location: 4905263 - 4906441 (+)
Gene ID: Rep_490_c_2_3707
Type:
Location: 4906438 - 4907079 (+)
Gene ID: Rep_490_c_2_3708
Type: CAZyme
Location: 4907076 - 4908227 (+)
Gene ID: Rep_490_c_2_3709
Type: TC
Location: 4908217 - 4910019 (+)
Gene ID: Rep_490_c_2_3710
Type: CAZyme
Location: 4910080 - 4911282 (+)
Gene ID: Rep_490_c_2_3711
Type: TC
Location: 4911305 - 4911931 (+)
Gene ID: Rep_490_c_2_3712
Type: pfam
Location: 4911993 - 4913066 (+)
Gene ID: Rep_490_c_2_3713
Type: pfam
Location: 4913074 - 4914408 (+)
Gene ID: Rep_490_c_2_3714
Type: TC
Location: 4914622 - 4915416 (+)
Gene ID: Rep_490_c_2_3715
Type: TC
Location: 4915429 - 4917876 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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