Cluster: PUL0470_Rep_490_C1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: Rep_490
- CGC Family ID: CGCFAM_00016
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0470_Rep_490_C1 | Rep_490_c_2_2438 | 3203226 | 3203768 | + | GerE |
| STP | PUL0470_Rep_490_C1 | Rep_490_c_2_2439 | 3203923 | 3204891 | + | FecR |
| TC | PUL0470_Rep_490_C1 | Rep_490_c_2_2440 | 3205072 | 3208404 | + | 1.B.14.6.13 |
| TC | PUL0470_Rep_490_C1 | Rep_490_c_2_2441 | 3208418 | 3209983 | + | 8.A.46.2.1 |
| CAZyme | PUL0470_Rep_490_C1 | Rep_490_c_2_2442 | 3210007 | 3211110 | + | GH18 |
| pfam | PUL0470_Rep_490_C1 | Rep_490_c_2_2443 | 3211140 | 3212330 | + | BT_3987-like_N | Laminin_G_3 |
Gene ID: Rep_490_c_2_2438
Type: TF
Location: 3203226 - 3203768 (+)
Type: TF
Location: 3203226 - 3203768 (+)
Gene ID: Rep_490_c_2_2439
Type: STP
Location: 3203923 - 3204891 (+)
Type: STP
Location: 3203923 - 3204891 (+)
Gene ID: Rep_490_c_2_2440
Type: TC
Location: 3205072 - 3208404 (+)
Type: TC
Location: 3205072 - 3208404 (+)
Gene ID: Rep_490_c_2_2441
Type: TC
Location: 3208418 - 3209983 (+)
Type: TC
Location: 3208418 - 3209983 (+)
Gene ID: Rep_490_c_2_2442
Type: CAZyme
Location: 3210007 - 3211110 (+)
Type: CAZyme
Location: 3210007 - 3211110 (+)
Gene ID: Rep_490_c_2_2443
Type: pfam
Location: 3211140 - 3212330 (+)
Type: pfam
Location: 3211140 - 3212330 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Composition
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