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Cluster: Rep_490_CGC92

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_490_c_2 Rep_490_c_2_3915 5160462 5161667 - GT2
pfam Rep_490_c_2 Rep_490_c_2_3916 5161705 5163207 - Polysacc_deac_3
CAZyme Rep_490_c_2 Rep_490_c_2_3917 5163232 5164083 - GT2
CAZyme Rep_490_c_2 Rep_490_c_2_3918 5164095 5165249 - GT4
CAZyme Rep_490_c_2 Rep_490_c_2_3919 5165253 5166164 - GT101
NULL(UNKNOWN) Rep_490_c_2 Rep_490_c_2_3920 5166177 5167307 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_490_c_2 Rep_490_c_2_3921 5167304 5168779 - 2.A.66.2.23
CAZyme Rep_490_c_2 Rep_490_c_2_3922 5168803 5169747 - GT2
CAZyme Rep_490_c_2 Rep_490_c_2_3923 5169794 5170912 - GT94
Gene ID: Rep_490_c_2_3915
Type: CAZyme
Location: 5160462 - 5161667 (-)
Gene ID: Rep_490_c_2_3916
Type: pfam
Location: 5161705 - 5163207 (-)
Gene ID: Rep_490_c_2_3917
Type: CAZyme
Location: 5163232 - 5164083 (-)
Gene ID: Rep_490_c_2_3918
Type: CAZyme
Location: 5164095 - 5165249 (-)
Gene ID: Rep_490_c_2_3919
Type: CAZyme
Location: 5165253 - 5166164 (-)
Gene ID: Rep_490_c_2_3920
Type:
Location: 5166177 - 5167307 (-)
Gene ID: Rep_490_c_2_3921
Type: TC
Location: 5167304 - 5168779 (-)
Gene ID: Rep_490_c_2_3922
Type: CAZyme
Location: 5168803 - 5169747 (-)
Gene ID: Rep_490_c_2_3923
Type: CAZyme
Location: 5169794 - 5170912 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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