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Cluster: Rep_490_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_490_c_2 Rep_490_c_2_322 381471 382568 - 9.B.146.1.4
pfam Rep_490_c_2 Rep_490_c_2_323 382654 383094 - FdtA
CAZyme Rep_490_c_2 Rep_490_c_2_324 383098 384300 - GT4
pfam Rep_490_c_2 Rep_490_c_2_325 384297 385166 - Epimerase | RmlD_sub_bind
pfam Rep_490_c_2 Rep_490_c_2_326 385178 386308 - Epimerase_2
TC Rep_490_c_2 Rep_490_c_2_327 386326 387399 - 9.B.18.2.1
CAZyme Rep_490_c_2 Rep_490_c_2_328 387482 388522 - GT4
pfam Rep_490_c_2 Rep_490_c_2_329 388527 389678 - EpsG
CAZyme Rep_490_c_2 Rep_490_c_2_330 389713 390702 - GT2
Gene ID: Rep_490_c_2_322
Type: TC
Location: 381471 - 382568 (-)
Gene ID: Rep_490_c_2_323
Type: pfam
Location: 382654 - 383094 (-)
Gene ID: Rep_490_c_2_324
Type: CAZyme
Location: 383098 - 384300 (-)
Gene ID: Rep_490_c_2_325
Type: pfam
Location: 384297 - 385166 (-)
Gene ID: Rep_490_c_2_326
Type: pfam
Location: 385178 - 386308 (-)
Gene ID: Rep_490_c_2_327
Type: TC
Location: 386326 - 387399 (-)
Gene ID: Rep_490_c_2_328
Type: CAZyme
Location: 387482 - 388522 (-)
Gene ID: Rep_490_c_2_329
Type: pfam
Location: 388527 - 389678 (-)
Gene ID: Rep_490_c_2_330
Type: CAZyme
Location: 389713 - 390702 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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