Genome Details
Selected Rep_genome_ID: Rep_2402
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
RUG11237
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| Rep_2402 | 3,257,450 | 98.5232% | 0.949367% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_2402_CGC17 | CGCFAM_00009 | Yes | 8 | 4 | |
| Rep_2402_CGC20 | CGCFAM_00011 | Yes | 8 | 4 | |
| Rep_2402_CGC25 | CGCFAM_00022 | Yes | 4 | 3 | |
| Rep_2402_CGC16 | CGCFAM_00032 | Yes | 6 | 3 | |
| Rep_2402_CGC22 | CGCFAM_00114 | Yes | 3 | 1 | |
| Rep_2402_CGC12 | CGCFAM_00117 | Yes | 6 | 1 | alpha-glucan |
| Rep_2402_CGC11 | CGCFAM_00179 | Yes | 3 | 1 | |
| Rep_2402_CGC14 | CGCFAM_00390 | Yes | 16 | 3 | |
| Rep_2402_CGC19 | CGCFAM_00424 | Yes | 9 | 5 | |
| Rep_2402_CGC8 | CGCFAM_00658 | Yes | 10 | 4 | |
| Rep_2402_CGC3 | CGCFAM_01857 | Yes | 3 | 1 | |
| Rep_2402_CGC10 | CGCFAM_09029 | Yes | 3 | 1 | |
| Rep_2402_CGC30 | CGCFAM_09075 | Yes | 3 | 1 | |
| Rep_2402_CGC1 | CGCFAM_09372 | Yes | 7 | 1 | |
| Rep_2402_CGC33 | CGCFAM_09374 | Yes | 3 | 1 | |
| Rep_2402_CGC6 | CGCFAM_09377 | Yes | 6 | 2 |
Top CAZyme Families