Cluster: Rep_2402_CGC22
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2402
- CGC Family ID: CGCFAM_00114
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2402_c_67 | Rep_2402_c_67_8 | 6695 | 7468 | - | 3.A.1.17.13 |
| TC | Rep_2402_c_67 | Rep_2402_c_67_9 | 7555 | 8460 | - | 1.A.23.2.1 |
| CAZyme | Rep_2402_c_67 | Rep_2402_c_67_10 | 8504 | 10705 | - | CBM48 | GH13_9 |
Gene ID: Rep_2402_c_67_8
Type: TC
Location: 6695 - 7468 (-)
Type: TC
Location: 6695 - 7468 (-)
Gene ID: Rep_2402_c_67_9
Type: TC
Location: 7555 - 8460 (-)
Type: TC
Location: 7555 - 8460 (-)
Gene ID: Rep_2402_c_67_10
Type: CAZyme
Location: 8504 - 10705 (-)
Type: CAZyme
Location: 8504 - 10705 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
RUG11237
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.