Cluster: Rep_2402_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2402
- CGC Family ID: CGCFAM_00022
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2402_c_69 | Rep_2402_c_69_59 | 53563 | 54912 | + | 8.A.3.2.3 |
| CAZyme | Rep_2402_c_69 | Rep_2402_c_69_60 | 54944 | 56125 | + | GT4 |
| CAZyme | Rep_2402_c_69 | Rep_2402_c_69_61 | 56161 | 57402 | + | GT4 |
| CAZyme | Rep_2402_c_69 | Rep_2402_c_69_62 | 57399 | 58139 | + | GT32 |
Gene ID: Rep_2402_c_69_59
Type: TC
Location: 53563 - 54912 (+)
Type: TC
Location: 53563 - 54912 (+)
Gene ID: Rep_2402_c_69_60
Type: CAZyme
Location: 54944 - 56125 (+)
Type: CAZyme
Location: 54944 - 56125 (+)
Gene ID: Rep_2402_c_69_61
Type: CAZyme
Location: 56161 - 57402 (+)
Type: CAZyme
Location: 56161 - 57402 (+)
Gene ID: Rep_2402_c_69_62
Type: CAZyme
Location: 57399 - 58139 (+)
Type: CAZyme
Location: 57399 - 58139 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
RUG11237
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.