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Cluster: Rep_2402_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2402_c_55 Rep_2402_c_55_65 72710 73528 - GT2
NULL(UNKNOWN) Rep_2402_c_55 Rep_2402_c_55_66 73707 74642 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2402_c_55 Rep_2402_c_55_67 74911 75873 - GT2
CAZyme Rep_2402_c_55 Rep_2402_c_55_68 75947 76918 - GT2
CAZyme Rep_2402_c_55 Rep_2402_c_55_69 76996 77946 - GT2
pfam Rep_2402_c_55 Rep_2402_c_55_70 77964 79016 - Acyl_transf_3
TC Rep_2402_c_55 Rep_2402_c_55_71 79036 79368 - 2.A.7.33.5
pfam Rep_2402_c_55 Rep_2402_c_55_72 79365 79736 - EamA
CAZyme Rep_2402_c_55 Rep_2402_c_55_73 79729 80664 - GT2
Gene ID: Rep_2402_c_55_65
Type: CAZyme
Location: 72710 - 73528 (-)
Gene ID: Rep_2402_c_55_66
Type:
Location: 73707 - 74642 (-)
Gene ID: Rep_2402_c_55_67
Type: CAZyme
Location: 74911 - 75873 (-)
Gene ID: Rep_2402_c_55_68
Type: CAZyme
Location: 75947 - 76918 (-)
Gene ID: Rep_2402_c_55_69
Type: CAZyme
Location: 76996 - 77946 (-)
Gene ID: Rep_2402_c_55_70
Type: pfam
Location: 77964 - 79016 (-)
Gene ID: Rep_2402_c_55_71
Type: TC
Location: 79036 - 79368 (-)
Gene ID: Rep_2402_c_55_72
Type: pfam
Location: 79365 - 79736 (-)
Gene ID: Rep_2402_c_55_73
Type: CAZyme
Location: 79729 - 80664 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
RUG11237
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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