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Cluster: Rep_2402_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2402_c_55 Rep_2402_c_55_86 98096 99946 - GT2
CAZyme Rep_2402_c_55 Rep_2402_c_55_87 99927 101759 - GT2
TC Rep_2402_c_55 Rep_2402_c_55_88 101784 102524 - 3.A.1.103.1
TC Rep_2402_c_55 Rep_2402_c_55_89 102534 103322 - 3.A.1.103.4
CAZyme Rep_2402_c_55 Rep_2402_c_55_90 103319 104326 - GT2
TC Rep_2402_c_55 Rep_2402_c_55_91 104336 105298 - 9.B.102.7.10
pfam Rep_2402_c_55 Rep_2402_c_55_92 105309 106565 - PS_pyruv_trans
CAZyme Rep_2402_c_55 Rep_2402_c_55_93 106569 107564 - GT2
Gene ID: Rep_2402_c_55_86
Type: CAZyme
Location: 98096 - 99946 (-)
Gene ID: Rep_2402_c_55_87
Type: CAZyme
Location: 99927 - 101759 (-)
Gene ID: Rep_2402_c_55_88
Type: TC
Location: 101784 - 102524 (-)
Gene ID: Rep_2402_c_55_89
Type: TC
Location: 102534 - 103322 (-)
Gene ID: Rep_2402_c_55_90
Type: CAZyme
Location: 103319 - 104326 (-)
Gene ID: Rep_2402_c_55_91
Type: TC
Location: 104336 - 105298 (-)
Gene ID: Rep_2402_c_55_92
Type: pfam
Location: 105309 - 106565 (-)
Gene ID: Rep_2402_c_55_93
Type: CAZyme
Location: 106569 - 107564 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
RUG11237
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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