Cluster: Rep_2402_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2402
- CGC Family ID: CGCFAM_00179
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2402_c_52 | Rep_2402_c_52_26 | 28104 | 30197 | + | 1.B.52.2.1 |
| STP | Rep_2402_c_52 | Rep_2402_c_52_27 | 30447 | 31241 | + | Response_reg | Spo0A_C |
| CAZyme | Rep_2402_c_52 | Rep_2402_c_52_28 | 31317 | 32759 | + | GT5 |
Gene ID: Rep_2402_c_52_26
Type: TC
Location: 28104 - 30197 (+)
Type: TC
Location: 28104 - 30197 (+)
Gene ID: Rep_2402_c_52_27
Type: STP
Location: 30447 - 31241 (+)
Type: STP
Location: 30447 - 31241 (+)
Gene ID: Rep_2402_c_52_28
Type: CAZyme
Location: 31317 - 32759 (+)
Type: CAZyme
Location: 31317 - 32759 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
RUG11237
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.