Cluster: Rep_2402_CGC33
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2402
- CGC Family ID: CGCFAM_09374
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2402_c_88 | Rep_2402_c_88_3 | 949 | 2085 | + | GH18 |
| STP | Rep_2402_c_88 | Rep_2402_c_88_4 | 2172 | 5525 | + | GGDEF |
| TC | Rep_2402_c_88 | Rep_2402_c_88_5 | 5704 | 6582 | + | 2.A.115.1.5 |
Gene ID: Rep_2402_c_88_3
Type: CAZyme
Location: 949 - 2085 (+)
Type: CAZyme
Location: 949 - 2085 (+)
Gene ID: Rep_2402_c_88_4
Type: STP
Location: 2172 - 5525 (+)
Type: STP
Location: 2172 - 5525 (+)
Gene ID: Rep_2402_c_88_5
Type: TC
Location: 5704 - 6582 (+)
Type: TC
Location: 5704 - 6582 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
RUG11237
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.