Cluster: Rep_2402_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2402
- CGC Family ID: CGCFAM_01857
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2402_c_15 | Rep_2402_c_15_11 | 12819 | 14585 | + | 3.A.1.135.5 |
| TC | Rep_2402_c_15 | Rep_2402_c_15_12 | 14572 | 16320 | + | 3.A.1.135.5 |
| CAZyme | Rep_2402_c_15 | Rep_2402_c_15_13 | 16763 | 20113 | + | CBM32 | CBM51 |
Gene ID: Rep_2402_c_15_11
Type: TC
Location: 12819 - 14585 (+)
Type: TC
Location: 12819 - 14585 (+)
Gene ID: Rep_2402_c_15_12
Type: TC
Location: 14572 - 16320 (+)
Type: TC
Location: 14572 - 16320 (+)
Gene ID: Rep_2402_c_15_13
Type: CAZyme
Location: 16763 - 20113 (+)
Type: CAZyme
Location: 16763 - 20113 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
RUG11237
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.