Cluster: Rep_2402_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2402
- CGC Family ID: CGCFAM_00032
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2402_c_55 | Rep_2402_c_55_34 | 36924 | 37841 | - | GT2 |
| NULL(UNKNOWN) | Rep_2402_c_55 | Rep_2402_c_55_35 | 37841 | 38008 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2402_c_55 | Rep_2402_c_55_36 | 37968 | 39149 | - | LytR_cpsA_psr |
| TC | Rep_2402_c_55 | Rep_2402_c_55_37 | 39173 | 40576 | - | 9.B.18.1.3 |
| CAZyme | Rep_2402_c_55 | Rep_2402_c_55_38 | 40718 | 41674 | - | GT2 |
| CAZyme | Rep_2402_c_55 | Rep_2402_c_55_39 | 41671 | 43257 | - | GT2 |
Gene ID: Rep_2402_c_55_34
Type: CAZyme
Location: 36924 - 37841 (-)
Type: CAZyme
Location: 36924 - 37841 (-)
Gene ID: Rep_2402_c_55_35
Type:
Location: 37841 - 38008 (-)
Type:
Location: 37841 - 38008 (-)
Gene ID: Rep_2402_c_55_36
Type: pfam
Location: 37968 - 39149 (-)
Type: pfam
Location: 37968 - 39149 (-)
Gene ID: Rep_2402_c_55_37
Type: TC
Location: 39173 - 40576 (-)
Type: TC
Location: 39173 - 40576 (-)
Gene ID: Rep_2402_c_55_38
Type: CAZyme
Location: 40718 - 41674 (-)
Type: CAZyme
Location: 40718 - 41674 (-)
Gene ID: Rep_2402_c_55_39
Type: CAZyme
Location: 41671 - 43257 (-)
Type: CAZyme
Location: 41671 - 43257 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
RUG11237
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.